Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.09■■□□□ 1.77
LTN1O94822 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 SLC25A1P2-201ENST00000430693 912 ntBASIC26.09■■□□□ 1.77
LTN1O94822 TSPY17P-201ENST00000450329 467 ntBASIC26.09■■□□□ 1.77
LTN1O94822 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.09■■□□□ 1.77
LTN1O94822 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.09■■□□□ 1.77
LTN1O94822 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.09■■□□□ 1.77
LTN1O94822 AC008622.2-201ENST00000617006 1229 ntBASIC26.09■■□□□ 1.77
LTN1O94822 AC116562.4-202ENST00000641738 218 ntBASIC26.09■■□□□ 1.77
LTN1O94822 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.09■■□□□ 1.77
LTN1O94822 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTN1O94822 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 ISCU-203ENST00000431221 799 ntTSL 2 BASIC26.08■■□□□ 1.77
LTN1O94822 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.08■■□□□ 1.77
LTN1O94822 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 CA15P1-201ENST00000481698 905 ntBASIC26.08■■□□□ 1.77
LTN1O94822 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.08■■□□□ 1.77
LTN1O94822 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
LTN1O94822 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.08■■□□□ 1.77
LTN1O94822 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
LTN1O94822 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTN1O94822 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
LTN1O94822 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.07■■□□□ 1.76
LTN1O94822 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.07■■□□□ 1.76
LTN1O94822 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.07■■□□□ 1.76
LTN1O94822 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC26.07■■□□□ 1.76
LTN1O94822 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.07■■□□□ 1.76
LTN1O94822 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
LTN1O94822 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
LTN1O94822 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
LTN1O94822 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.07■■□□□ 1.76
LTN1O94822 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 AC139887.4-201ENST00000607877 719 ntBASIC26.07■■□□□ 1.76
LTN1O94822 AL023803.3-201ENST00000615559 522 ntBASIC26.07■■□□□ 1.76
LTN1O94822 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.07■■□□□ 1.76
LTN1O94822 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
LTN1O94822 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTN1O94822 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.06■■□□□ 1.76
LTN1O94822 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 COPS8-203ENST00000409334 794 ntTSL 5 BASIC26.06■■□□□ 1.76
LTN1O94822 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC26.06■■□□□ 1.76
LTN1O94822 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.06■■□□□ 1.76
LTN1O94822 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.06■■□□□ 1.76
LTN1O94822 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.06■■□□□ 1.76
LTN1O94822 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTN1O94822 AC073314.1-201ENST00000568729 2216 ntBASIC26.06■■□□□ 1.76
LTN1O94822 AC092338.2-201ENST00000568827 1415 ntBASIC26.06■■□□□ 1.76
LTN1O94822 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.05■■□□□ 1.76
LTN1O94822 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.05■■□□□ 1.76
LTN1O94822 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26.05■■□□□ 1.76
LTN1O94822 AC116407.4-201ENST00000623319 1061 ntBASIC26.05■■□□□ 1.76
LTN1O94822 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTN1O94822 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTN1O94822 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LTN1O94822 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
LTN1O94822 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC26.05■■□□□ 1.76
LTN1O94822 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LTN1O94822 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.05■■□□□ 1.76
LTN1O94822 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.05■■□□□ 1.76
LTN1O94822 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
LTN1O94822 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LTN1O94822 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.04■■□□□ 1.76
LTN1O94822 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTN1O94822 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTN1O94822 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC26.04■■□□□ 1.76
LTN1O94822 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
LTN1O94822 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTN1O94822 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTN1O94822 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
LTN1O94822 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTN1O94822 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
LTN1O94822 COX11P1-201ENST00000489116 835 ntBASIC26.04■■□□□ 1.76
LTN1O94822 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.04■■□□□ 1.76
LTN1O94822 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.04■■□□□ 1.76
LTN1O94822 AC130371.2-201ENST00000619443 611 ntBASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms