Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 AC092368.3-202ENST00000574180 1591 ntBASIC19.59■□□□□ 0.73
GPC4O75487 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GPC4O75487 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC4O75487 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC4O75487 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.59■□□□□ 0.73
GPC4O75487 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.59■□□□□ 0.73
GPC4O75487 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GPC4O75487 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC4O75487 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GPC4O75487 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC4O75487 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 AL158211.5-201ENST00000623583 2518 ntBASIC19.58■□□□□ 0.73
GPC4O75487 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC4O75487 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC4O75487 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GPC4O75487 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC4O75487 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.58■□□□□ 0.72
GPC4O75487 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.58■□□□□ 0.72
GPC4O75487 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC4O75487 PNMA6B-201ENST00000538162 1200 ntBASIC19.58■□□□□ 0.72
GPC4O75487 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GPC4O75487 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC4O75487 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.58■□□□□ 0.72
GPC4O75487 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.58■□□□□ 0.72
GPC4O75487 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GPC4O75487 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC4O75487 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GPC4O75487 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.57■□□□□ 0.72
GPC4O75487 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.57■□□□□ 0.72
GPC4O75487 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC4O75487 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.57■□□□□ 0.72
GPC4O75487 KRT16P6-202ENST00000425692 1426 ntBASIC19.57■□□□□ 0.72
GPC4O75487 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 AC125437.2-201ENST00000625180 2167 ntBASIC19.57■□□□□ 0.72
GPC4O75487 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GPC4O75487 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC4O75487 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 AL691432.2-201ENST00000607222 2038 ntBASIC19.56■□□□□ 0.72
GPC4O75487 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 AL390719.1-204ENST00000412397 1219 ntBASIC19.56■□□□□ 0.72
GPC4O75487 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.56■□□□□ 0.72
GPC4O75487 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms