Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC25A3P1-201ENST00000443844 931 ntBASIC19.42■□□□□ 0.7
PCDHGA12O60330 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGA12O60330 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA12O60330 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA12O60330 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA12O60330 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA12O60330 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 AL031985.4-201ENST00000642138 673 ntBASIC19.41■□□□□ 0.7
PCDHGA12O60330 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA12O60330 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA12O60330 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 AC026271.3-201ENST00000571884 352 ntBASIC19.4■□□□□ 0.7
PCDHGA12O60330 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA12O60330 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA12O60330 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
PCDHGA12O60330 AC007952.6-201ENST00000573168 2673 ntBASIC19.39■□□□□ 0.7
PCDHGA12O60330 AC003957.1-201ENST00000625108 2673 ntBASIC19.39■□□□□ 0.7
PCDHGA12O60330 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PCDHGA12O60330 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA12O60330 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
PCDHGA12O60330 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA12O60330 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 AC121338.2-201ENST00000622535 1744 ntBASIC19.39■□□□□ 0.69
PCDHGA12O60330 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA12O60330 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA12O60330 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGA12O60330 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA12O60330 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA12O60330 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGA12O60330 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGA12O60330 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHGA12O60330 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA12O60330 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms