Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
SGCEO43556 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.28■□□□□ 0.36
SGCEO43556 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SGCEO43556 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.28■□□□□ 0.36
SGCEO43556 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.28■□□□□ 0.36
SGCEO43556 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
SGCEO43556 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SGCEO43556 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SGCEO43556 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SGCEO43556 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SGCEO43556 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
SGCEO43556 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 AC018553.1-201ENST00000616682 1458 ntBASIC17.27■□□□□ 0.36
SGCEO43556 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SGCEO43556 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.27■□□□□ 0.36
SGCEO43556 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.27■□□□□ 0.36
SGCEO43556 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.27■□□□□ 0.36
SGCEO43556 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.27■□□□□ 0.36
SGCEO43556 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.27■□□□□ 0.36
SGCEO43556 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SGCEO43556 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
SGCEO43556 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
SGCEO43556 AC116351.2-201ENST00000606540 1585 ntBASIC17.27■□□□□ 0.35
SGCEO43556 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.27■□□□□ 0.35
SGCEO43556 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SGCEO43556 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SGCEO43556 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.26■□□□□ 0.35
SGCEO43556 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.26■□□□□ 0.35
SGCEO43556 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.26■□□□□ 0.35
SGCEO43556 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.26■□□□□ 0.35
SGCEO43556 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.26■□□□□ 0.35
SGCEO43556 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.26■□□□□ 0.35
SGCEO43556 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.26■□□□□ 0.35
SGCEO43556 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
SGCEO43556 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SGCEO43556 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SGCEO43556 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SGCEO43556 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SGCEO43556 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SGCEO43556 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SGCEO43556 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.25■□□□□ 0.35
SGCEO43556 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.25■□□□□ 0.35
SGCEO43556 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.25■□□□□ 0.35
SGCEO43556 RPS2P52-201ENST00000469610 820 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms