Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.29■□□□□ 0.84
COCHO43405 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 AC097493.4-201ENST00000641197 219 ntBASIC20.29■□□□□ 0.84
COCHO43405 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COCHO43405 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.28■□□□□ 0.84
COCHO43405 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COCHO43405 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.28■□□□□ 0.84
COCHO43405 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COCHO43405 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.28■□□□□ 0.84
COCHO43405 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.28■□□□□ 0.84
COCHO43405 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.28■□□□□ 0.84
COCHO43405 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.28■□□□□ 0.84
COCHO43405 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COCHO43405 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COCHO43405 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COCHO43405 TCF3P1-201ENST00000423021 1937 ntBASIC20.27■□□□□ 0.84
COCHO43405 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.27■□□□□ 0.84
COCHO43405 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.27■□□□□ 0.84
COCHO43405 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
COCHO43405 FITM1-202ENST00000559294 800 ntBASIC20.27■□□□□ 0.84
COCHO43405 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.27■□□□□ 0.84
COCHO43405 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.27■□□□□ 0.84
COCHO43405 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COCHO43405 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COCHO43405 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COCHO43405 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COCHO43405 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COCHO43405 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
COCHO43405 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.26■□□□□ 0.83
COCHO43405 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COCHO43405 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COCHO43405 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.26■□□□□ 0.83
COCHO43405 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
COCHO43405 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COCHO43405 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COCHO43405 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.25■□□□□ 0.83
COCHO43405 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
COCHO43405 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COCHO43405 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.25■□□□□ 0.83
COCHO43405 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.25■□□□□ 0.83
COCHO43405 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COCHO43405 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
COCHO43405 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COCHO43405 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COCHO43405 RCC2P6-201ENST00000526625 1557 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms