Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN2O15020 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN2O15020 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SPTBN2O15020 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.7■□□□□ 0.58
SPTBN2O15020 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.7■□□□□ 0.58
SPTBN2O15020 NEK4P2-201ENST00000580004 1012 ntBASIC18.7■□□□□ 0.58
SPTBN2O15020 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPTBN2O15020 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN2O15020 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPTBN2O15020 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SPTBN2O15020 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.69■□□□□ 0.58
SPTBN2O15020 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
SPTBN2O15020 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTBN2O15020 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.69■□□□□ 0.58
SPTBN2O15020 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
SPTBN2O15020 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.69■□□□□ 0.58
SPTBN2O15020 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SPTBN2O15020 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.69■□□□□ 0.58
SPTBN2O15020 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 AC140113.2-201ENST00000604370 208 ntBASIC18.69■□□□□ 0.58
SPTBN2O15020 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.69■□□□□ 0.58
SPTBN2O15020 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.69■□□□□ 0.58
SPTBN2O15020 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPTBN2O15020 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN2O15020 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 KRT18P1-202ENST00000452408 1331 ntBASIC18.68■□□□□ 0.58
SPTBN2O15020 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.68■□□□□ 0.58
SPTBN2O15020 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.68■□□□□ 0.58
SPTBN2O15020 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.68■□□□□ 0.58
SPTBN2O15020 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN2O15020 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SPTBN2O15020 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SPTBN2O15020 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.68■□□□□ 0.58
SPTBN2O15020 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.68■□□□□ 0.58
SPTBN2O15020 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.68■□□□□ 0.58
SPTBN2O15020 AC091304.2-201ENST00000564639 760 ntBASIC18.68■□□□□ 0.58
SPTBN2O15020 AC012615.1-201ENST00000565797 1299 ntBASIC18.68■□□□□ 0.58
SPTBN2O15020 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SPTBN2O15020 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.68■□□□□ 0.58
SPTBN2O15020 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPTBN2O15020 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN2O15020 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPTBN2O15020 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 AC011498.5-201ENST00000592027 486 ntBASIC18.67■□□□□ 0.58
SPTBN2O15020 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.67■□□□□ 0.58
SPTBN2O15020 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPTBN2O15020 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPTBN2O15020 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
SPTBN2O15020 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.67■□□□□ 0.58
SPTBN2O15020 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SPTBN2O15020 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
SPTBN2O15020 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.67■□□□□ 0.58
SPTBN2O15020 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms