Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC188H7C350 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC188H7C350 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC188H7C350 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC188H7C350 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC188H7C350 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC188H7C350 AC006333.2-201ENST00000607957 2099 ntBASIC20.36■□□□□ 0.85
CCDC188H7C350 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC188H7C350 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCDC188H7C350 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CCDC188H7C350 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC188H7C350 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC188H7C350 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC188H7C350 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC188H7C350 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC188H7C350 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC188H7C350 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CCDC188H7C350 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC188H7C350 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC188H7C350 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC188H7C350 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC188H7C350 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 AC079598.2-202ENST00000546624 1451 ntBASIC20.34■□□□□ 0.85
CCDC188H7C350 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC188H7C350 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CCDC188H7C350 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC188H7C350 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC188H7C350 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC188H7C350 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC188H7C350 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC188H7C350 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC188H7C350 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC188H7C350 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC188H7C350 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 KRT18P11-201ENST00000435214 1283 ntBASIC20.33■□□□□ 0.85
CCDC188H7C350 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC188H7C350 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC188H7C350 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC188H7C350 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC188H7C350 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC188H7C350 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC188H7C350 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
CCDC188H7C350 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CCDC188H7C350 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC188H7C350 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC188H7C350 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CCDC188H7C350 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC188H7C350 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC188H7C350 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CCDC188H7C350 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC188H7C350 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms