Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TCRBV3S1A0A5B6 FP475955.4-201ENST00000623131 1990 ntBASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TCRBV3S1A0A5B6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 AP000997.3-201ENST00000623333 2250 ntBASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 AL136967.2-201ENST00000623968 743 ntBASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TCRBV3S1A0A5B6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.33■□□□□ 0.53
TCRBV3S1A0A5B6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 LTB4R2-202ENST00000528054 3092 ntBASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
TCRBV3S1A0A5B6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms