Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRDV1A0A1B0GX56 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 AC093525.10-201ENST00000625130 1569 ntBASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 PHGDH-210ENST00000641115 1638 ntBASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 MIR939-201ENST00000401314 82 ntBASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
TRDV1A0A1B0GX56 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 BICD1-207ENST00000551848 1962 ntBASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 AC091305.1-201ENST00000479476 895 ntBASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 CYP21A1P-202ENST00000354927 1481 ntBASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRDV1A0A1B0GX56 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AC018470.1-201ENST00000624790 3129 ntBASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 TEX21P-204ENST00000641479 1693 ntBASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 PBX2P1-201ENST00000493219 1291 ntBASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRDV1A0A1B0GX56 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms