Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC196A0A1B0GTZ2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 KRT18P16-201ENST00000510337 1294 ntBASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 RN7SL471P-201ENST00000580476 299 ntBASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.8■■□□□ 1.24
CCDC196A0A1B0GTZ2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 NBPF21P-201ENST00000425093 1451 ntBASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 TSPY20P-201ENST00000450910 630 ntBASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.79■■□□□ 1.24
CCDC196A0A1B0GTZ2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.78■■□□□ 1.24
CCDC196A0A1B0GTZ2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 AL158211.5-201ENST00000623583 2518 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC239809.2-201ENST00000415381 517 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 TUBB8P6-201ENST00000436895 1288 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 AC004264.1-201ENST00000608354 794 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 ITM2C-210ENST00000620962 501 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 AL023875.1-201ENST00000640777 796 ntBASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC196A0A1B0GTZ2 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.77■■□□□ 1.23
CCDC196A0A1B0GTZ2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 KRT8P8-201ENST00000434750 1448 ntBASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC133681.1-201ENST00000465482 601 ntBASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms