Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 MFAP1P1-201ENST00000442257 1255 ntBASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 CCR12P-201ENST00000446203 998 ntBASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV17A0A0B4J275 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 HMGA1P5-201ENST00000412453 271 ntBASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 SLC25A1P2-201ENST00000430693 912 ntBASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 AC104076.2-201ENST00000448912 469 ntBASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV17A0A0B4J275 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 BX664615.1-201ENST00000443558 458 ntBASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AC008040.2-201ENST00000461049 708 ntBASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AC091390.4-202ENST00000476426 537 ntBASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 FAM87A-204ENST00000613235 858 ntBASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV17A0A0B4J275 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 Z85996.1-201ENST00000494644 937 ntBASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 AL160286.2-201ENST00000567150 934 ntBASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV17A0A0B4J275 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms