Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RNA5SP500-201ENST00000364486 119 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 SNORD115-48-201ENST00000364764 76 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RNA5SP211-201ENST00000365516 117 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RNU6-40P-201ENST00000384254 107 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 MTCO2P31-201ENST00000402702 684 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RN7SKP29-201ENST00000410957 272 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC002504.1-201ENST00000438281 691 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 SUMO2P3-201ENST00000438311 288 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AL513321.1-201ENST00000441175 761 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 CUBNP2-201ENST00000443534 1139 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC093166.4-201ENST00000457867 318 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RNU1-88P-201ENST00000459274 128 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 TRBV8-1-201ENST00000481590 279 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 OR7E157P-201ENST00000494376 911 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC021106.1-201ENST00000509020 1058 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 MRPS36P5-201ENST00000551909 298 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC007225.2-201ENST00000562529 256 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC069431.2-201ENST00000604149 1099 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 OR7M1P-201ENST00000608946 533 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AL137246.2-201ENST00000613439 662 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RN7SL544P-201ENST00000617232 284 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RN7SL763P-201ENST00000620922 284 ntBASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTDP1Q9Y5B0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC006511.3-201ENST00000624929 1783 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 RNA5SP394-201ENST00000364216 119 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 U3.25-201ENST00000391209 220 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC116036.1-201ENST00000412199 367 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC093155.2-201ENST00000420734 937 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 MTND4LP13-201ENST00000425022 298 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC087894.1-201ENST00000538359 518 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 MIR4420-201ENST00000583944 77 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC008751.2-201ENST00000597885 980 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC234772.3-201ENST00000602277 528 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 FO393422.1-201ENST00000603908 708 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC106052.1-201ENST00000608029 497 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC245389.2-201ENST00000616023 576 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC242843.1-201ENST00000618702 573 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AL390318.1-201ENST00000624564 687 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AP003399.1-201ENST00000637534 361 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC068137.4-201ENST00000638485 296 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 OR11H2-202ENST00000641517 1085 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 AC026523.2-201ENST00000625039 7739 ntBASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CTDP1Q9Y5B0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms