Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 AC005261.4-201ENST00000600047 1385 ntBASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PPARGC1AQ9UBK2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 BX005019.1-201ENST00000561881 1810 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RNU6-83P-201ENST00000384568 112 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL451046.1-201ENST00000406097 534 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RNU6-648P-201ENST00000410190 107 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 UBE2V1P14-201ENST00000415815 558 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RPS17P17-201ENST00000419392 409 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RPSAP32-201ENST00000432681 526 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL035458.1-201ENST00000433096 585 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC094019.1-201ENST00000434678 472 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC118469.1-201ENST00000442943 488 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 MTND2P4-201ENST00000445034 1004 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 ANKRD26P4-201ENST00000455755 950 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL133477.1-201ENST00000457472 514 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 USP9YP25-201ENST00000457708 443 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RPS27P20-201ENST00000492051 246 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL117692.1-201ENST00000494283 713 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 XKRY-201ENST00000510392 1100 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RFPL1S-203ENST00000539579 330 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC024909.2-201ENST00000553035 286 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AP001269.3-201ENST00000588718 329 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC105129.3-201ENST00000605455 485 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC024257.5-201ENST00000612739 531 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AC017007.4-201ENST00000503353 1352 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 AL731532.1-201ENST00000623972 4236 ntBASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PPARGC1AQ9UBK2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 ELL2P3-201ENST00000457883 1602 ntBASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 GUCY1B2-204ENST00000531898 1979 ntBASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 LCN1P2-201ENST00000372030 223 ntBASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PPARGC1AQ9UBK2 AL360271.1-201ENST00000395679 510 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms