Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 PSMC1P7-201ENST00000495689 1315 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SF3A3P1-201ENST00000446317 1477 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 MFSD8-218ENST00000641186 4448 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AP003471.1-202ENST00000319051 1988 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 OR5P1P-201ENST00000299512 925 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 RNA5SP79-201ENST00000365193 109 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 RNU1-122P-201ENST00000365538 156 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL391419.1-201ENST00000398901 1275 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AP000357.1-201ENST00000409926 1165 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC092647.1-201ENST00000420654 287 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 DPY19L1P2-201ENST00000426647 915 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 HMGB1P16-201ENST00000447155 540 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL035407.2-201ENST00000454090 378 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC022730.2-201ENST00000465359 452 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC006070.1-201ENST00000508151 193 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 OR7E83P-201ENST00000511021 970 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC010486.1-201ENST00000511793 424 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.704-201ENST00000516851 102 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 TRMT10BP1-201ENST00000519377 943 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 YWHABP2-201ENST00000540201 713 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 MIR4433B-201ENST00000581329 102 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC007136.1-201ENST00000589141 199 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC136443.5-201ENST00000603741 370 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL133255.1-201ENST00000606374 441 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL136985.2-201ENST00000607372 535 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 Z95327.3-201ENST00000610385 572 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 MLECP1-201ENST00000615893 709 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 HTR1DP1-201ENST00000616500 888 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AL445670.1-201ENST00000618889 801 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC129908.1-201ENST00000624553 648 ntBASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUEDC1Q9NWM3 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.31□□□□□ -1.24
CUEDC1Q9NWM3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms