Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC096947.1-201ENST00000603233 470 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AL512506.1-201ENST00000613918 449 ntBASIC5.83□□□□□ -1.48
EBF3Q9H4W6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
EBF3Q9H4W6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MTND4P9-201ENST00000507819 1346 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MIR620-201ENST00000385232 95 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MIR130A-201ENST00000385274 89 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 RNU1-77P-201ENST00000390868 162 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 NANOGP4-201ENST00000427230 913 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 NPM1P22-201ENST00000427761 952 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 CYCSP6-201ENST00000434498 302 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC096775.1-201ENST00000437724 448 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 RPL5P25-201ENST00000441148 775 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 RPS23P2-201ENST00000463671 415 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 RPL7P39-201ENST00000481157 744 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC004815.1-201ENST00000484185 331 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 DUTP1-201ENST00000493631 470 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC098862.1-201ENST00000504991 413 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC093763.2-201ENST00000505334 1223 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC021146.10-201ENST00000515628 706 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 snoU109.5-201ENST00000516231 132 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 CDC42P3-201ENST00000518493 633 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MTND2P13-201ENST00000577438 1039 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 BNIP3P32-201ENST00000600015 554 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 WBP1LP8-201ENST00000617401 327 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 SAMMSON-227ENST00000642114 1199 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MRRFP1-201ENST00000435941 1675 ntBASIC5.82□□□□□ -1.48
EBF3Q9H4W6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EBF3Q9H4W6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 MFSD8-239ENST00000641590 2479 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 AC053481.2-202ENST00000582394 1500 ntBASIC5.81□□□□□ -1.48
EBF3Q9H4W6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.81□□□□□ -1.48
EBF3Q9H4W6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms