Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 SP110-215ENST00000540870 2032 ntTSL 2 BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 CAP1P2-201ENST00000417455 1409 ntBASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 AC145138.1-201ENST00000512908 2851 ntBASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 EEF1A1P6-201ENST00000434005 1384 ntBASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP3-1Q9BYR8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CASC19-284ENST00000642142 1868 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC022031.1-201ENST00000585985 2593 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPL4P3-201ENST00000428881 1311 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 XIST-206ENST00000434839 2865 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AL031123.2-201ENST00000563225 3325 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RNU6-28P-201ENST00000362378 107 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RNU6-450P-201ENST00000364654 107 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RNY3P13-201ENST00000365542 102 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 Y_RNA.380-201ENST00000365663 111 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CREM-213ENST00000374734 711 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPS3AP5-201ENST00000389400 821 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 MTCO2P33-201ENST00000402100 465 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPSAP35-201ENST00000413753 818 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPL36AP36-201ENST00000418616 301 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PGBD4P6-201ENST00000421501 610 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPL7P28-201ENST00000437739 740 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 SUMO2P3-201ENST00000438311 288 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CBX1P4-201ENST00000439415 457 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 OSTCP8-201ENST00000445117 448 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC006463.1-201ENST00000445929 232 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC020550.1-201ENST00000447385 163 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CDC42P2-201ENST00000448566 569 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AL118520.1-201ENST00000450770 291 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 PGA5-202ENST00000451616 971 ntTSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC006455.3-201ENST00000454641 333 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RNU6-1132P-201ENST00000459214 107 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC023194.2-201ENST00000465398 406 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RN7SL318P-201ENST00000471955 297 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 CREM-231ENST00000479070 939 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RPL29P11-201ENST00000494408 492 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RN7SL62P-201ENST00000498506 297 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC112173.1-201ENST00000505876 327 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC112203.1-201ENST00000506315 1020 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC008526.1-201ENST00000509149 338 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 RNU6-699P-201ENST00000517081 110 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC012400.1-201ENST00000518452 381 ntBASIC4.26□□□□□ -1.73
KRTAP3-1Q9BYR8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms