Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC100778.3-201ENST00000580060 1750 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AL731532.2-201ENST00000623542 1953 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 OR3A2-201ENST00000408891 1076 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 NPM1P40-201ENST00000412758 733 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC104333.2-201ENST00000422630 192 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 FMO7P-201ENST00000436045 768 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 GTF3AP5-201ENST00000442645 697 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 NIFKP7-201ENST00000503365 834 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 NPM1P21-201ENST00000513394 762 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AP006245.2-201ENST00000522004 300 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC073869.7-201ENST00000640874 297 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 AC114786.1-201ENST00000512892 1415 ntBASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 CASC19-248ENST00000641674 1356 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 CIR1P2-201ENST00000514821 1342 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AL603750.1-201ENST00000624216 1717 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC010266.2-201ENST00000564741 3255 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC02019-201ENST00000608605 2060 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 DBIP1-201ENST00000401435 260 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC117434.1-201ENST00000419971 836 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC113412.1-201ENST00000425840 504 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC013410.1-201ENST00000436223 1232 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 ATP5LP3-201ENST00000514223 304 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AL512624.1-201ENST00000613638 469 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 AC027279.1-201ENST00000568885 4284 ntBASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CRLF3Q8IUI8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 MTCO1P7-201ENST00000419523 1542 ntBASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CRLF3Q8IUI8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms