Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-615P-201ENST00000516065 106 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 TRIM77BP-201ENST00000524985 1119 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.93□□□□□ -1.62
RFX4Q33E94 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.93□□□□□ -1.62
RFX4Q33E94 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX4Q33E94 ADAM3B-201ENST00000569937 840 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 DPRXP4-201ENST00000578053 568 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AP005403.1-201ENST00000579720 229 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.93□□□□□ -1.62
RFX4Q33E94 AC037198.3-201ENST00000616754 526 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 AL122125.1-201ENST00000616999 600 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 FO681491.1-202ENST00000623392 737 ntBASIC4.93□□□□□ -1.62
RFX4Q33E94 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX4Q33E94 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX4Q33E94 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.93□□□□□ -1.62
RFX4Q33E94 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX4Q33E94 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.92□□□□□ -1.62
RFX4Q33E94 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 HCFC2P1-201ENST00000392864 1592 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX4Q33E94 RNA5SP394-201ENST00000364216 119 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 RNA5SP223-201ENST00000365174 120 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 HMGB1P20-201ENST00000402555 677 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 VN1R12P-201ENST00000403778 876 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 GAPDHP42-201ENST00000406848 981 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC099535.1-201ENST00000408928 371 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AL389925.1-201ENST00000432257 728 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AL450996.1-201ENST00000445574 1202 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 MRPL35P2-201ENST00000448009 511 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 BTF3P6-201ENST00000448054 499 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC079168.1-201ENST00000458741 345 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC092754.1-201ENST00000472975 479 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 RN7SKP46-201ENST00000515942 234 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.92□□□□□ -1.62
RFX4Q33E94 TOMM20P1-201ENST00000534518 427 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 IGBP1P1-201ENST00000554337 1009 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC107958.1-201ENST00000556576 290 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AL390726.5-202ENST00000564800 256 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.92□□□□□ -1.62
RFX4Q33E94 AC067773.1-201ENST00000603284 1094 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC022106.2-201ENST00000620114 757 ntBASIC4.92□□□□□ -1.62
RFX4Q33E94 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX4Q33E94 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFX4Q33E94 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX4Q33E94 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 TET1P1-201ENST00000426627 2301 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RFX4Q33E94 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 MTHFD2P5-201ENST00000320415 844 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 OR7E25P-201ENST00000344844 931 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 OR7E156P-201ENST00000400303 464 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 RN7SKP16-201ENST00000410180 299 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX4Q33E94 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX4Q33E94 OR6D1P-201ENST00000436165 939 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 LRRC37A14P-201ENST00000452297 462 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 HLA-DPA3-207ENST00000454398 229 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 RN7SL741P-201ENST00000482473 289 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 MTND6P2-201ENST00000512226 524 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 AP001496.3-201ENST00000580230 913 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms