Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPL7P51-201ENST00000490532 749 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC104109.1-201ENST00000498563 436 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN20P56880 CYCSP22-201ENST00000517555 339 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 IGLVIV-64-201ENST00000518581 301 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC078899.1-201ENST00000521432 1185 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC112191.2-201ENST00000522428 333 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 IGKV3D-34-201ENST00000522638 302 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AP003102.1-201ENST00000525638 661 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC113192.3-201ENST00000529152 742 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN20P56880 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN20P56880 AC233266.2-201ENST00000567067 528 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 AC015911.5-201ENST00000587076 451 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC242628.1-201ENST00000606810 391 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL139022.2-201ENST00000606934 443 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC004775.1-201ENST00000607389 753 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 RNU6-84P-201ENST00000607737 102 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL163051.2-201ENST00000618976 735 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN20P56880 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 KARSP1-201ENST00000451871 1752 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN20P56880 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC018809.2-201ENST00000602436 3823 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 AC010132.2-201ENST00000295493 1043 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AL159987.1-201ENST00000347911 293 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 U3.7-201ENST00000363668 216 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 OR13C3-201ENST00000374781 1108 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 RPL10P10-201ENST00000403509 664 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 MTND2P15-201ENST00000418575 892 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 MARK2P12-201ENST00000420129 585 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC093155.2-201ENST00000420734 937 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 AL034379.1-201ENST00000423216 253 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CLDN20P56880 AL627224.1-201ENST00000448334 444 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 AC022215.1-201ENST00000481770 362 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 HMGB1P3-201ENST00000502802 616 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 MTCO1P31-201ENST00000506355 492 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN20P56880 RNU6-1102P-201ENST00000516149 96 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC021678.3-201ENST00000517893 476 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.18□□□□□ -1.58
CLDN20P56880 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 HMGB1P42-201ENST00000532126 553 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC027544.3-201ENST00000535082 757 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 DPPA2P4-201ENST00000563717 878 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC096996.1-201ENST00000563813 325 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC005242.1-201ENST00000585658 438 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN20P56880 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 BNIP3P35-201ENST00000604530 490 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC067838.1-201ENST00000606064 577 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 FAM72A-208ENST00000607379 1139 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AL133481.2-203ENST00000607558 139 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 RN7SL787P-201ENST00000613000 284 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 AC097460.3-201ENST00000623099 442 ntBASIC5.18□□□□□ -1.58
CLDN20P56880 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN20P56880 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms