Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FABP7P1-201ENST00000424004 391 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 CENPIP1-201ENST00000425713 902 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AL732292.1-201ENST00000426692 226 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 CYCSP11-201ENST00000436426 315 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A5P29400 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL4A5P29400 SNORA70.11-201ENST00000515987 138 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 SNORA70.13-201ENST00000516116 138 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AC012339.2-201ENST00000523996 453 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 AC027667.1-201ENST00000545814 304 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AC020915.5-201ENST00000596836 964 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AC005962.2-201ENST00000611427 652 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AL392048.1-201ENST00000613946 534 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 AL450226.2-201ENST00000622913 439 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 AC099654.2-201ENST00000433031 1980 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL4A5P29400 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A5P29400 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A5P29400 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL4A5P29400 AL161722.2-201ENST00000434731 981 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 NDUFB4P8-201ENST00000435351 367 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 NIP7P2-201ENST00000485801 544 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 AP003080.1-202ENST00000526526 915 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 MIR6853-201ENST00000619642 74 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 AC021106.3-201ENST00000623925 531 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL4A5P29400 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 AC091046.3-201ENST00000631455 1574 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL4A5P29400 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A5P29400 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A5P29400 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 MIR129-1-201ENST00000384972 72 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 MIR1193-201ENST00000408109 78 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 NRBF2P3-201ENST00000432731 865 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 OR1H1P-201ENST00000448731 937 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A5P29400 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A5P29400 RN7SKP92-201ENST00000517266 244 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A5P29400 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A5P29400 AP000919.1-201ENST00000582850 985 ntBASIC6.07□□□□□ -1.44
COL4A5P29400 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A5P29400 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A5P29400 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.06□□□□□ -1.44
COL4A5P29400 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL4A5P29400 RNA5SP447-201ENST00000363749 119 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 SNORA2.3-201ENST00000383920 135 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A5P29400 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A5P29400 TAAR4P-201ENST00000454843 1039 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 AK3P4-201ENST00000504283 583 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A5P29400 KPNA2P3-201ENST00000584190 848 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 AC125494.2-201ENST00000602431 657 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 AL139124.1-201ENST00000609123 421 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.06□□□□□ -1.44
COL4A5P29400 MIR6830-201ENST00000636015 70 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 MAPK10-371ENST00000641952 5209 ntBASIC6.06□□□□□ -1.44
COL4A5P29400 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A5P29400 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A5P29400 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A5P29400 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A5P29400 AC079298.1-201ENST00000625026 1619 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms