Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC025574.2-201ENST00000615621 514 ntBASIC5.38□□□□□ -1.55
CDH1P12830 AC026367.3-201ENST00000619032 590 ntBASIC5.38□□□□□ -1.55
CDH1P12830 AC006249.1-201ENST00000621223 471 ntBASIC5.38□□□□□ -1.55
CDH1P12830 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH1P12830 AC008691.1-209ENST00000642094 814 ntBASIC5.38□□□□□ -1.55
CDH1P12830 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH1P12830 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDH1P12830 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 MT-RNR2-201ENST00000387347 1559 ntBASIC5.38□□□□□ -1.55
CDH1P12830 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH1P12830 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH1P12830 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH1P12830 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH1P12830 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 U3.7-201ENST00000363668 216 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH1P12830 RPSAP35-201ENST00000413753 818 ntBASIC5.37□□□□□ -1.55
CDH1P12830 OR6E1P-201ENST00000414424 923 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 NDUFB4P8-201ENST00000435351 367 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AC002504.1-201ENST00000438281 691 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AL606490.8-201ENST00000441624 319 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AL450996.1-201ENST00000445574 1202 ntBASIC5.37□□□□□ -1.55
CDH1P12830 C1DP3-201ENST00000455013 423 ntBASIC5.37□□□□□ -1.55
CDH1P12830 RN7SL583P-201ENST00000475692 287 ntBASIC5.37□□□□□ -1.55
CDH1P12830 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 MTND3P24-201ENST00000506306 329 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH1P12830 AP003049.1-201ENST00000529418 457 ntBASIC5.37□□□□□ -1.55
CDH1P12830 OR5AM1P-201ENST00000532136 1032 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH1P12830 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 RBM22P12-201ENST00000567098 1255 ntBASIC5.37□□□□□ -1.55
CDH1P12830 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH1P12830 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH1P12830 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 RN7SL787P-201ENST00000613000 284 ntBASIC5.37□□□□□ -1.55
CDH1P12830 AC127024.6-201ENST00000621598 424 ntBASIC5.37□□□□□ -1.55
CDH1P12830 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 AC006453.5-201ENST00000636451 619 ntBASIC5.37□□□□□ -1.55
CDH1P12830 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH1P12830 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH1P12830 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH1P12830 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH1P12830 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH1P12830 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH1P12830 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH1P12830 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH1P12830 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH1P12830 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH1P12830 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH1P12830 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH1P12830 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH1P12830 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH1P12830 RNA5SP122-201ENST00000384457 108 ntBASIC5.36□□□□□ -1.55
CDH1P12830 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH1P12830 AL050305.1-201ENST00000399993 1230 ntBASIC5.36□□□□□ -1.55
CDH1P12830 NACAP7-201ENST00000407371 609 ntBASIC5.36□□□□□ -1.55
CDH1P12830 AL596448.1-201ENST00000415024 392 ntBASIC5.36□□□□□ -1.55
CDH1P12830 HYALP1-201ENST00000417674 1279 ntBASIC5.36□□□□□ -1.55
CDH1P12830 AL133173.1-201ENST00000423458 397 ntBASIC5.36□□□□□ -1.55
CDH1P12830 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH1P12830 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH1P12830 AC092106.1-201ENST00000444291 373 ntBASIC5.36□□□□□ -1.55
CDH1P12830 AL161636.2-201ENST00000445179 927 ntBASIC5.36□□□□□ -1.55
CDH1P12830 VN1R48P-201ENST00000448149 1036 ntBASIC5.36□□□□□ -1.55
CDH1P12830 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CDH1P12830 MTND5P8-201ENST00000449817 1083 ntBASIC5.36□□□□□ -1.55
CDH1P12830 MORF4L1P4-201ENST00000450245 976 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms