Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 AC079414.3-201ENST00000612986 1090 ntBASIC6.53□□□□□ -1.36
RGPD3A6NKT7 AC073869.8-201ENST00000641806 335 ntBASIC6.53□□□□□ -1.36
RGPD3A6NKT7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 PRNCR1-201ENST00000635449 12727 ntBASIC6.53□□□□□ -1.36
RGPD3A6NKT7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.53□□□□□ -1.36
RGPD3A6NKT7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.52□□□□□ -1.36
RGPD3A6NKT7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RGPD3A6NKT7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 MFSD8-220ENST00000641243 1422 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 RPL11P3-201ENST00000395256 523 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 TDGF1P1-201ENST00000445734 527 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 OR1H1P-201ENST00000448731 937 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 snoU109.5-201ENST00000516231 132 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 SCARNA20.4-201ENST00000516969 131 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AP000619.2-201ENST00000546014 969 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 RNU1-59P-201ENST00000364829 162 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 U3.22-201ENST00000391120 215 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 CENPIP1-201ENST00000425713 902 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 RPL34P27-201ENST00000428810 349 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 LINC02210-201ENST00000444561 288 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 RN7SL814P-201ENST00000487715 300 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 OR4A43P-201ENST00000532938 908 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 U1.25-201ENST00000614085 162 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 U1.34-201ENST00000618578 162 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 U1.31-201ENST00000620022 160 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.52□□□□□ -1.37
RGPD3A6NKT7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.52□□□□□ -1.37
RGPD3A6NKT7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC097063.1-201ENST00000426714 1797 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 ZNF652P1-201ENST00000442420 1309 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC124944.2-201ENST00000429866 1242 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC093840.1-201ENST00000511599 336 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AP003080.1-202ENST00000526526 915 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 RPL12P25-202ENST00000598100 674 ntBASIC6.51□□□□□ -1.37
RGPD3A6NKT7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RGPD3A6NKT7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 AL359715.3-201ENST00000569267 2123 ntBASIC6.5□□□□□ -1.37
RGPD3A6NKT7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 SNORD113.2-201ENST00000364166 89 ntBASIC6.5□□□□□ -1.37
RGPD3A6NKT7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RGPD3A6NKT7 U3.30-201ENST00000391308 210 ntBASIC6.5□□□□□ -1.37
RGPD3A6NKT7 OR8V1P-201ENST00000395193 873 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms