Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SKP17-201ENST00000411242 351 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 MRPL53P1-201ENST00000414323 319 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 BX510359.3-201ENST00000422168 306 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 RPL5P2-201ENST00000429598 854 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 HMGB3P24-201ENST00000433260 622 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 ARL5AP3-201ENST00000439327 386 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 SPRYD7P1-201ENST00000443861 570 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 RPS26P39-201ENST00000469206 341 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AP001372.4-201ENST00000524889 472 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 HMGB1P42-201ENST00000532126 553 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 MTND2P17-201ENST00000550281 688 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC051619.2-201ENST00000559063 397 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 MIR4489-201ENST00000578869 62 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 RN7SL339P-201ENST00000580597 296 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC013244.3-201ENST00000605614 388 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC097655.1-201ENST00000635075 318 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 TMEM30CP-203ENST00000637814 1035 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 AC004656.1-201ENST00000568479 4951 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ICE2P1-201ENST00000512800 1849 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 SNORA64.1-201ENST00000362600 132 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RNA5SP211-201ENST00000365516 117 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-650P-201ENST00000365658 111 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-1000P-201ENST00000391066 106 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AL391422.1-201ENST00000402155 436 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RN7SKP29-201ENST00000410957 272 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 BMS1P13-201ENST00000417301 885 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AL512637.2-201ENST00000431287 1256 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC108693.1-201ENST00000496068 432 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 RN7SL284P-201ENST00000498823 275 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 OSBPL9P3-201ENST00000534523 595 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 MIR1273E-201ENST00000581165 102 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC006116.5-201ENST00000591936 559 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC119501.1-201ENST00000603646 475 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC069234.4-201ENST00000621276 412 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 CU639417.4-201ENST00000623928 207 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 AC099654.9-201ENST00000637055 678 ntBASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.25□□□□□ -1.41
SSX2IPQ9Y2D8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 AC006484.1-201ENST00000435086 1884 ntBASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 AC015799.1-201ENST00000622996 3122 ntBASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 CDY11P-201ENST00000447168 1651 ntBASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 AL034546.1-201ENST00000623740 3693 ntBASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 AP005432.1-201ENST00000580891 3485 ntBASIC6.24□□□□□ -1.41
SSX2IPQ9Y2D8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms