Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 MEAF6P1-201ENST00000416092 327 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC019050.1-201ENST00000418508 492 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 RPSAP59-201ENST00000421048 890 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL109913.1-201ENST00000421173 514 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 USP9YP18-201ENST00000425912 695 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 DSTNP5-201ENST00000427921 523 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 FO393419.3-201ENST00000428741 282 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 FTLP17-201ENST00000432567 525 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 ARAFP2-201ENST00000440565 559 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 SSXP1-201ENST00000453640 473 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 USP9YP34-201ENST00000453983 808 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC117392.1-201ENST00000487061 596 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RN7SL608P-201ENST00000492377 279 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC006499.5-201ENST00000505037 514 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC117522.1-201ENST00000509821 380 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC109445.1-201ENST00000512356 383 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNU6-506P-201ENST00000516553 94 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNA5SP278-201ENST00000517055 102 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 SNORA59B-202ENST00000578183 701 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC061975.3-201ENST00000583209 244 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC011921.2-201ENST00000589465 152 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 VN1R92P-201ENST00000598511 928 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL157899.1-201ENST00000604110 936 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC106028.5-201ENST00000610332 395 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL161420.1-201ENST00000619393 264 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC016717.3-201ENST00000624730 554 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC124944.3-204ENST00000641191 150 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 LCOR-201ENST00000286067 4542 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC003985.2-201ENST00000562268 1669 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 OR5E1P-201ENST00000305754 927 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RNU4-81P-201ENST00000363561 144 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RNU6-114P-201ENST00000384704 105 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSU72Q9NP77 TAF9BP1-201ENST00000396646 746 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 RN7SKP161-201ENST00000411110 305 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RPL21P108-201ENST00000413857 481 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 RPS7P13-201ENST00000413955 498 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 RPL7P30-201ENST00000420888 709 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 OR8F1P-201ENST00000425243 930 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 MTCO1P3-201ENST00000429327 192 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 DBIL5P2-201ENST00000443827 253 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.66□□□□□ -1.34
SSU72Q9NP77 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.66□□□□□ -1.34
SSU72Q9NP77 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms