Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SETP10-201ENST00000424368 814 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC106901.1-201ENST00000425086 698 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AL138899.2-201ENST00000439139 499 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC073909.1-201ENST00000447112 999 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 OR52E3P-201ENST00000452083 936 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 RN7SL51P-201ENST00000468230 285 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 MORF4L2P1-201ENST00000503761 858 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 IMPA1P1-201ENST00000510718 842 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AP002981.1-201ENST00000517692 975 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AP004607.2-201ENST00000533949 322 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC008521.2-201ENST00000591021 259 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC127024.6-201ENST00000621598 424 ntBASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
LRRC40Q9H9A6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC133552.1-201ENST00000569988 4007 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 OR9G4-201ENST00000302957 984 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 U3.7-201ENST00000363668 216 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RN7SKP153-201ENST00000365026 316 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 MIR1282-201ENST00000408865 101 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 OR52E7P-201ENST00000452394 933 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RPL5P16-201ENST00000471467 790 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC090638.1-201ENST00000498296 909 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC016559.2-201ENST00000510759 359 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AL359219.2-201ENST00000555184 348 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC092944.2-201ENST00000605443 889 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 OR51C1P-201ENST00000608504 942 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RNA5SP440-201ENST00000612665 119 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RN7SL787P-201ENST00000613000 284 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AL691477.1-201ENST00000624398 162 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 AL353796.1-201ENST00000561542 3241 ntBASIC5.44□□□□□ -1.54
LRRC40Q9H9A6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 TCP11X1-202ENST00000622971 1372 ntBASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC40Q9H9A6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms