Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL158152.1-201ENST00000602652 1435 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 MRPS21P2-201ENST00000424704 264 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 NRBF2P3-201ENST00000432731 865 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 SLC25A18P1-201ENST00000449385 454 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC023818.1-201ENST00000498379 384 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 PPM1AP1-201ENST00000502740 1135 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 OR4A43P-201ENST00000532938 908 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 AP000756.2-201ENST00000624168 2567 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC100757.1-201ENST00000616872 1835 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 MTCO1P15-201ENST00000529569 1526 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 MIR23B-201ENST00000384832 97 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 RN7SKP106-201ENST00000410832 272 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AF186996.5-201ENST00000418098 904 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 RPL7P57-201ENST00000423238 740 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AL390879.1-201ENST00000439143 386 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 REG1CP-206ENST00000447469 496 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 SCARNA22-201ENST00000503991 125 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.51□□□□□ -1.05
IFT140Q96RY7 RPL12P25-202ENST00000598100 674 ntBASIC8.51□□□□□ -1.05
IFT140Q96RY7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
IFT140Q96RY7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AC010329.1-201ENST00000593903 8328 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AL590240.1-201ENST00000334118 313 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 MAX-203ENST00000341653 330 ntTSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 RNA5SP447-201ENST00000363749 119 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 SNORA70H-201ENST00000383910 135 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 SNORA70J-201ENST00000384182 135 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 AL161722.2-201ENST00000434731 981 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AC133555.2-201ENST00000550213 292 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 GLRXP2-201ENST00000555594 321 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AC069366.1-201ENST00000583159 838 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
IFT140Q96RY7 AL161637.1-201ENST00000622380 412 ntBASIC8.5□□□□□ -1.05
IFT140Q96RY7 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.5□□□□□ -1.05
IFT140Q96RY7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 AC124944.2-201ENST00000429866 1242 ntBASIC8.49□□□□□ -1.05
IFT140Q96RY7 LINC02210-201ENST00000444561 288 ntBASIC8.49□□□□□ -1.05
IFT140Q96RY7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.49□□□□□ -1.05
IFT140Q96RY7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
IFT140Q96RY7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
IFT140Q96RY7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms