Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 Z84478.1-201ENST00000438230 1219 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 RN7SL515P-201ENST00000463999 297 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AGGF1P3-201ENST00000493675 1213 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC027243.2-201ENST00000602530 724 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AL137072.1-201ENST00000603444 466 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC009027.1-201ENST00000604510 479 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC100767.2-201ENST00000604840 693 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 CXADRP3-202ENST00000617265 1100 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC103703.1-201ENST00000634783 663 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AC093591.2-201ENST00000565254 3843 ntBASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.15□□□□□ -1.59
CLHC1Q8NHS4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 BRAFP1-201ENST00000445336 2703 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AL672167.2-201ENST00000377164 879 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 DBIP1-201ENST00000401435 260 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 GAPDHP42-201ENST00000406848 981 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 OR2AT2P-201ENST00000413438 905 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 EEF1B2P8-201ENST00000414101 671 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 OR51A6P-201ENST00000418680 1004 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC090018.1-201ENST00000434369 367 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 RPL36AP39-201ENST00000445859 318 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 OR52E7P-201ENST00000452394 933 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 LDHBP2-201ENST00000456969 1005 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 NDUFA5P5-201ENST00000468361 342 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 TMEM97P2-201ENST00000517841 403 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AL049872.1-201ENST00000556323 322 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC107958.1-201ENST00000556576 290 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC122134.1-201ENST00000565664 1104 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 MIR4660-201ENST00000583549 74 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLHC1Q8NHS4 RLIMP2-201ENST00000427891 1563 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 RPL12P9-201ENST00000412942 488 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 RPL24P2-201ENST00000421023 475 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC017019.1-201ENST00000426129 261 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 GAPDHP34-201ENST00000432112 823 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 GSTM5P1-201ENST00000434751 660 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC138866.2-201ENST00000508650 584 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 IMPA1P1-201ENST00000510718 842 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.13□□□□□ -1.59
CLHC1Q8NHS4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms