Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GAPDHP53-201ENST00000458397 924 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 MTND6P2-201ENST00000512226 524 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC069240.2-201ENST00000550242 609 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC010287.1-201ENST00000566916 357 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC025678.1-201ENST00000567861 338 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 RN7SL66P-201ENST00000582099 264 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 RN7SL667P-201ENST00000582817 298 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 BNIP3P26-201ENST00000600827 554 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 MIR6885-201ENST00000612241 66 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 MLECP1-201ENST00000615893 709 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC137590.2-201ENST00000619709 240 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC006504.8-201ENST00000621046 635 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 DDX43P1-201ENST00000510713 1763 ntBASIC7.53□□□□□ -1.2
NPAS3Q8IXF0 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.52□□□□□ -1.2
NPAS3Q8IXF0 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
NPAS3Q8IXF0 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
NPAS3Q8IXF0 AC092999.1-201ENST00000624004 1924 ntBASIC7.52□□□□□ -1.2
NPAS3Q8IXF0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.52□□□□□ -1.2
NPAS3Q8IXF0 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RNU6-1106P-201ENST00000390845 107 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LDHAP5-201ENST00000394996 622 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL136100.1-201ENST00000407696 330 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 VN1R8P-201ENST00000407739 893 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC009302.1-201ENST00000417147 390 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RPL18AP14-201ENST00000417685 526 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL353678.1-201ENST00000422735 741 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 PNRC2P1-201ENST00000423940 420 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MTCYBP9-201ENST00000431021 303 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL627224.1-201ENST00000448334 444 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 CYCSP42-201ENST00000450823 238 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 U8.20-201ENST00000459445 131 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RPS20P20-201ENST00000460498 340 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MTCO2P29-201ENST00000465212 189 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RPL30P9-201ENST00000465586 330 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC115223.1-201ENST00000466377 870 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL591122.1-201ENST00000487348 492 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC122718.2-201ENST00000505325 591 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC108120.1-201ENST00000506543 991 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RNU6-1170P-201ENST00000515974 106 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 SNORA19.2-201ENST00000516013 114 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MIR4428-201ENST00000584884 73 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 XIAPP1-201ENST00000603162 600 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MIR6780B-201ENST00000610307 79 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL121809.2-201ENST00000613169 341 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL355974.3-201ENST00000617383 467 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AL161420.1-201ENST00000619393 264 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC090617.10-201ENST00000624308 134 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC008626.2-201ENST00000624425 248 ntBASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms