Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC069222.1-201ENST00000608028 3360 ntBASIC7.7□□□□□ -1.18
RNF135Q8IUD6 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF135Q8IUD6 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF135Q8IUD6 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.7□□□□□ -1.18
RNF135Q8IUD6 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RNF135Q8IUD6 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RNF135Q8IUD6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CASC19-205ENST00000641013 1411 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 UG0898H09-202ENST00000623646 7040 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL353795.1-201ENST00000439134 1775 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC012213.2-201ENST00000562917 4597 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 RNU6-98P-201ENST00000384173 107 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SNORD94-201ENST00000386037 137 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 RN7SKP268-201ENST00000411107 316 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 BTF3L4P3-201ENST00000418879 476 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 FTH1P5-201ENST00000425761 545 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MYO5BP3-201ENST00000431872 1279 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL831737.1-201ENST00000441288 271 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 OR7E125P-201ENST00000443450 846 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 OR51P1P-201ENST00000447547 942 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL031736.1-201ENST00000449688 618 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC079193.1-201ENST00000460497 588 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC005550.2-201ENST00000476382 318 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 RPL29P23-201ENST00000486188 442 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 LARP1BP2-201ENST00000486594 519 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 RPL5P33-201ENST00000487833 905 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC073610.1-201ENST00000489971 396 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC111193.1-201ENST00000504097 155 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 PTGES3P3-201ENST00000511479 482 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MTCYBP43-201ENST00000513621 740 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AP005902.2-201ENST00000518393 307 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 CARSP2-201ENST00000520688 277 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC092032.1-201ENST00000603090 165 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC233280.2-201ENST00000603917 1070 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL049634.3-201ENST00000604968 457 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AL139089.1-201ENST00000620372 975 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC026108.1-201ENST00000635444 547 ntBASIC7.69□□□□□ -1.18
RNF135Q8IUD6 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF135Q8IUD6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF135Q8IUD6 RNU6-839P-201ENST00000363347 108 ntBASIC7.68□□□□□ -1.18
RNF135Q8IUD6 RNY4P14-201ENST00000363656 96 ntBASIC7.68□□□□□ -1.18
RNF135Q8IUD6 RNA5SP238-201ENST00000365464 120 ntBASIC7.68□□□□□ -1.18
RNF135Q8IUD6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms