Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.07□□□□□ -1.12
PACS2Q86VP3 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 AC090337.1-201ENST00000579651 2074 ntBASIC8.07□□□□□ -1.12
PACS2Q86VP3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 ZNF658B-201ENST00000602828 3408 ntBASIC8.07□□□□□ -1.12
PACS2Q86VP3 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PACS2Q86VP3 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
PACS2Q86VP3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 Y_RNA.176-201ENST00000363815 109 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 Y_RNA.307-201ENST00000365022 117 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 SNORD3H-201ENST00000384486 214 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AL583835.1-201ENST00000399570 407 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 Y_RNA.615-201ENST00000410769 117 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AL136133.1-201ENST00000413694 376 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 CHEK2P3-201ENST00000416118 248 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 HSPE1P1-201ENST00000421494 318 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 GAPDHP73-201ENST00000423411 1007 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 USP24P1-201ENST00000433802 779 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AL136380.1-201ENST00000447970 162 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 RN7SL554P-201ENST00000468197 292 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 TRBV8-2-201ENST00000475637 270 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 OR9A3P-202ENST00000485185 878 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 PGAM4P2-201ENST00000512491 721 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 GAPDHP35-201ENST00000513369 976 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC104986.1-201ENST00000517978 436 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 RN7SL155P-201ENST00000581538 263 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC104785.1-201ENST00000603220 588 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC143336.1-201ENST00000614164 836 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 uc_338.15-201ENST00000615470 191 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 MAPK10-371ENST00000641952 5209 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PACS2Q86VP3 MTND5P27-201ENST00000428871 1720 ntBASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PACS2Q86VP3 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC8.05□□□□□ -1.12
PACS2Q86VP3 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PACS2Q86VP3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PACS2Q86VP3 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.05□□□□□ -1.12
PACS2Q86VP3 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.05□□□□□ -1.12
PACS2Q86VP3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms