Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNRPCP11-201ENST00000492453 205 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC005868.1-201ENST00000536421 331 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AP001496.3-201ENST00000580230 913 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 RN7SL52P-201ENST00000584271 284 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.35□□□□□ -1.71
SSBP1Q04837 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 OR7M1P-201ENST00000608946 533 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AP005131.7-201ENST00000610087 611 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 RN7SL787P-201ENST00000613000 284 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 MIR6883-201ENST00000614952 78 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 MIR6721-201ENST00000617181 87 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC114786.1-201ENST00000512892 1415 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 YES1P1-201ENST00000418510 1628 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP1Q04837 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSBP1Q04837 RNA5SP232-201ENST00000364144 119 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSBP1Q04837 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.34□□□□□ -1.71
SSBP1Q04837 MGAT2P2-201ENST00000427194 797 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 AC104843.2-201ENST00000427666 297 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 BX323845.3-201ENST00000428215 527 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 RNU2-45P-201ENST00000516068 187 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 AC113191.1-201ENST00000517759 403 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 LINC00556-201ENST00000569603 412 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 MIR4502-201ENST00000580432 81 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 MIR4433B-201ENST00000581329 102 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.34□□□□□ -1.71
SSBP1Q04837 MIR6829-201ENST00000620375 67 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC007603.3-201ENST00000636915 979 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.34□□□□□ -1.71
SSBP1Q04837 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSBP1Q04837 SSXP3-201ENST00000442971 1300 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 DDX18P5-201ENST00000534547 1306 ntBASIC4.34□□□□□ -1.71
SSBP1Q04837 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP1Q04837 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP1Q04837 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP1Q04837 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.34□□□□□ -1.72
SSBP1Q04837 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.34□□□□□ -1.72
SSBP1Q04837 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSBP1Q04837 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SSBP1Q04837 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.34□□□□□ -1.72
SSBP1Q04837 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AC021242.1-201ENST00000507315 2035 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 UGT2B26P-201ENST00000508672 1613 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.33□□□□□ -1.72
SSBP1Q04837 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 AC068446.1-201ENST00000556425 1549 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 RBPJP2-201ENST00000618187 1444 ntBASIC4.33□□□□□ -1.72
SSBP1Q04837 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSBP1Q04837 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.33□□□□□ -1.72
SSBP1Q04837 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms