Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 CDY14P-201ENST00000431260 1014 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 AL161722.2-201ENST00000434731 981 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 CDY12P-201ENST00000440679 1015 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 CDY13P-201ENST00000445813 1015 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 CDY23P-201ENST00000451661 1014 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 AC010547.7-201ENST00000570323 333 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 AC100847.1-201ENST00000611316 481 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PRKDCP78527 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 SNORD56.6-201ENST00000384569 71 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKDCP78527 RNU2-30P-201ENST00000516209 141 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.58□□□□□ -1.84
PRKDCP78527 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKDCP78527 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 MIR6853-201ENST00000619642 74 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 AC119674.1-213ENST00000641177 1386 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 OR56B2P-202ENST00000641377 2453 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 MIR659-201ENST00000384963 97 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 AL161909.1-201ENST00000397390 712 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKDCP78527 NOP56P2-201ENST00000447491 769 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 AC097173.1-201ENST00000505862 819 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 AC084783.1-201ENST00000565846 910 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 AC021422.1-201ENST00000621212 473 ntBASIC3.58□□□□□ -1.84
PRKDCP78527 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
PRKDCP78527 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKDCP78527 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKDCP78527 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 AL590762.2-201ENST00000395798 571 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 FABP7P1-201ENST00000424004 391 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC079922.1-201ENST00000443291 359 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 AC108463.1-201ENST00000450258 347 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 AC108475.1-201ENST00000507880 950 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 OR4A43P-201ENST00000532938 908 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 DCN-218ENST00000551354 2924 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.57□□□□□ -1.84
PRKDCP78527 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 SNORA62.3-201ENST00000365110 153 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 SNORA2.3-201ENST00000383920 135 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKDCP78527 MEMO1P4-201ENST00000453590 386 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 MIR4301-201ENST00000577203 66 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKDCP78527 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PRKDCP78527 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PRKDCP78527 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 AP000542.3-201ENST00000623391 6114 ntBASIC3.57□□□□□ -1.84
PRKDCP78527 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKDCP78527 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PRKDCP78527 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms