Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR585-201ENST00000384887 94 ntBASIC5.37□□□□□ -1.55
PDX1P52945 RNA5SP339-201ENST00000390987 122 ntBASIC5.37□□□□□ -1.55
PDX1P52945 RPL11P3-201ENST00000395256 523 ntBASIC5.37□□□□□ -1.55
PDX1P52945 RN7SKP125-201ENST00000410481 302 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 AC005033.1-201ENST00000428904 813 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 AL606490.8-201ENST00000441624 319 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AC009963.4-201ENST00000448535 339 ntBASIC5.37□□□□□ -1.55
PDX1P52945 RPS23P2-201ENST00000463671 415 ntBASIC5.37□□□□□ -1.55
PDX1P52945 RPL15P21-201ENST00000495592 567 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 EIF4A2P5-201ENST00000529914 499 ntBASIC5.37□□□□□ -1.55
PDX1P52945 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
PDX1P52945 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.37□□□□□ -1.55
PDX1P52945 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 AC018690.1-201ENST00000608144 626 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AC116651.1-201ENST00000609724 556 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AC025574.2-201ENST00000615621 514 ntBASIC5.37□□□□□ -1.55
PDX1P52945 AC009120.7-201ENST00000623452 780 ntBASIC5.37□□□□□ -1.55
PDX1P52945 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 AP001153.1-201ENST00000641024 338 ntBASIC5.37□□□□□ -1.55
PDX1P52945 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDX1P52945 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 AC015799.1-201ENST00000622996 3122 ntBASIC5.37□□□□□ -1.55
PDX1P52945 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 AL158152.1-201ENST00000602652 1435 ntBASIC5.37□□□□□ -1.55
PDX1P52945 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 BX284613.1-201ENST00000452221 1641 ntBASIC5.37□□□□□ -1.55
PDX1P52945 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDX1P52945 AC004076.2-201ENST00000620532 3323 ntBASIC5.36□□□□□ -1.55
PDX1P52945 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
PDX1P52945 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.36□□□□□ -1.55
PDX1P52945 AC005294.1-201ENST00000355509 281 ntBASIC5.36□□□□□ -1.55
PDX1P52945 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 RN7SKP213-201ENST00000410746 298 ntBASIC5.36□□□□□ -1.55
PDX1P52945 RN7SKP279-201ENST00000411383 298 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AC098592.2-201ENST00000413158 265 ntBASIC5.36□□□□□ -1.55
PDX1P52945 VN1R31P-201ENST00000417498 730 ntBASIC5.36□□□□□ -1.55
PDX1P52945 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.36□□□□□ -1.55
PDX1P52945 RPL7AP6-201ENST00000477943 801 ntBASIC5.36□□□□□ -1.55
PDX1P52945 BX284632.1-201ENST00000478218 541 ntBASIC5.36□□□□□ -1.55
PDX1P52945 RPSAP50-201ENST00000481955 852 ntBASIC5.36□□□□□ -1.55
PDX1P52945 CR383656.1-201ENST00000484916 377 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.36□□□□□ -1.55
PDX1P52945 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.36□□□□□ -1.55
PDX1P52945 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.36□□□□□ -1.55
PDX1P52945 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
PDX1P52945 BLZF2P-201ENST00000553776 1130 ntBASIC5.36□□□□□ -1.55
PDX1P52945 NPM1P5-201ENST00000557228 838 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.36□□□□□ -1.55
PDX1P52945 RN7SL708P-201ENST00000580952 299 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.36□□□□□ -1.55
PDX1P52945 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.36□□□□□ -1.55
PDX1P52945 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.36□□□□□ -1.55
PDX1P52945 HIRAP1-201ENST00000605318 787 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AC015802.5-201ENST00000607478 399 ntBASIC5.36□□□□□ -1.55
PDX1P52945 MIR6798-201ENST00000612887 67 ntBASIC5.36□□□□□ -1.55
PDX1P52945 AL590410.1-201ENST00000617925 333 ntBASIC5.36□□□□□ -1.55
PDX1P52945 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDX1P52945 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.36□□□□□ -1.55
PDX1P52945 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 SAMMSON-209ENST00000641222 1100 ntBASIC5.36□□□□□ -1.55
PDX1P52945 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.36□□□□□ -1.55
PDX1P52945 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.36□□□□□ -1.55
PDX1P52945 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDX1P52945 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.35□□□□□ -1.55
PDX1P52945 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AC007938.2-201ENST00000604666 2634 ntBASIC5.35□□□□□ -1.55
PDX1P52945 PWAR1-201ENST00000624188 2414 ntBASIC5.35□□□□□ -1.55
PDX1P52945 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PDX1P52945 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
PDX1P52945 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDX1P52945 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDX1P52945 RNU1-106P-201ENST00000384382 164 ntBASIC5.35□□□□□ -1.55
PDX1P52945 MIR765-201ENST00000390226 114 ntBASIC5.35□□□□□ -1.55
PDX1P52945 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms