Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 NPM1P18-201ENST00000434232 732 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AL445928.1-201ENST00000435545 222 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 AL591719.1-201ENST00000444669 744 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 AL445991.1-201ENST00000450381 475 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 LRRC37A14P-201ENST00000452297 462 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RBMY2HP-201ENST00000457961 720 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RN7SL197P-201ENST00000466981 299 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 RPSAP51-201ENST00000497462 645 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RN7SL612P-201ENST00000497704 295 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC112673.1-201ENST00000513168 575 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 ZNF519P4-201ENST00000514008 125 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 GAPDHP62-201ENST00000515313 990 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 SNORA74.1-201ENST00000516320 180 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.66□□□□□ -1.5
EPHA3P29320 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC068020.1-201ENST00000594215 661 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHA3P29320 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC130352.1-201ENST00000602979 661 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC022022.2-201ENST00000602989 360 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC012368.3-201ENST00000604190 219 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.66□□□□□ -1.5
EPHA3P29320 Z99289.3-201ENST00000605586 594 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC006386.1-201ENST00000619436 415 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 AC211486.4-201ENST00000621495 113 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 RPL23AP61-201ENST00000623642 466 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHA3P29320 AC132825.7-201ENST00000638744 335 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 CR788268.1-201ENST00000603931 1809 ntBASIC5.66□□□□□ -1.5
EPHA3P29320 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHA3P29320 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHA3P29320 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHA3P29320 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
EPHA3P29320 U3.23-201ENST00000391132 200 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
EPHA3P29320 GAPDHP15-201ENST00000398586 975 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AL034417.1-201ENST00000399343 800 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 RN7SKP108-201ENST00000411367 328 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHA3P29320 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.65□□□□□ -1.5
EPHA3P29320 MTND2P16-201ENST00000419987 799 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 XKRYP1-201ENST00000423438 492 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 VTI1BP4-201ENST00000427516 527 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHA3P29320 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHA3P29320 XKRYP2-201ENST00000432915 492 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AL022324.2-201ENST00000434827 780 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 PA2G4P6-201ENST00000438325 1197 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHA3P29320 SNRPFP2-201ENST00000440710 251 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 RPL5P25-201ENST00000441148 775 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
EPHA3P29320 AL356121.1-201ENST00000442911 156 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.65□□□□□ -1.5
EPHA3P29320 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.65□□□□□ -1.5
EPHA3P29320 AC234771.2-201ENST00000445718 597 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 MTATP6P26-201ENST00000445926 662 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC023271.1-201ENST00000445936 1090 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 PPIAP32-201ENST00000449940 472 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC073476.1-201ENST00000452854 407 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 AC008280.2-201ENST00000455473 307 ntBASIC5.65□□□□□ -1.5
EPHA3P29320 RNU1-88P-201ENST00000459274 128 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms