Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 AL355377.1-201ENST00000621125 1653 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 RNA5SP514-201ENST00000363717 111 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 RNU4-4P-201ENST00000364588 130 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 Y_RNA.318-201ENST00000365131 97 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 RNU6-729P-201ENST00000384399 107 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 MIR137-201ENST00000385223 102 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 TAF9BP1-201ENST00000396646 746 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 SNORA11C-201ENST00000408532 129 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 RN7SKP108-201ENST00000411367 328 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 MORF4L1P6-201ENST00000418771 268 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC110602.1-201ENST00000437414 318 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC092393.1-201ENST00000439625 742 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AL359265.1-201ENST00000440296 795 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC009263.1-201ENST00000441193 1239 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 MTND5P2-201ENST00000442927 1142 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC012123.2-201ENST00000485809 248 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC095057.1-201ENST00000507583 168 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 IMPA1P1-201ENST00000510718 842 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC093755.1-201ENST00000512950 1023 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 ZNF519P4-201ENST00000514008 125 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.55□□□□□ -1.2
ERCC3P19447 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC087465.1-201ENST00000560574 245 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC090888.1-201ENST00000561335 1141 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC006539.2-201ENST00000601729 572 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC022400.9-201ENST00000623633 273 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AP001962.1-201ENST00000624114 559 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC068620.4-201ENST00000636730 1182 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 AC053481.2-202ENST00000582394 1500 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 HSPD1P9-201ENST00000420325 1636 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.55□□□□□ -1.2
ERCC3P19447 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 AL596244.1-201ENST00000567068 3779 ntBASIC7.55□□□□□ -1.2
ERCC3P19447 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 CASC19-260ENST00000641828 2001 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.54□□□□□ -1.2
ERCC3P19447 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
ERCC3P19447 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
ERCC3P19447 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 Y_RNA.192-201ENST00000363977 102 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 OR1L1-202ENST00000373686 1083 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 OR52E6-202ENST00000379946 954 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 RNU6-77P-201ENST00000410554 91 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AL445213.1-201ENST00000412589 747 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AL359092.1-201ENST00000417156 265 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AC114814.2-201ENST00000419195 485 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
ERCC3P19447 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 THAP5P1-201ENST00000439089 262 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.54□□□□□ -1.2
ERCC3P19447 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.54□□□□□ -1.2
ERCC3P19447 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 AC026782.2-201ENST00000510845 636 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 RNA5SP418-201ENST00000515951 117 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 AP004609.2-201ENST00000532177 190 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms