Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 SACS-202ENST00000402364 15134 ntTSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 NCLP2-201ENST00000416078 1462 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 SNORA2.3-201ENST00000383920 135 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 ATP5F1P3-201ENST00000397213 657 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 ARL4AP5-201ENST00000404372 599 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 RN7SL814P-201ENST00000487715 300 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 AC012400.1-201ENST00000518452 381 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 RN7SL176P-201ENST00000580352 264 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 AC024220.1-201ENST00000603675 484 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 RNA5SP196-201ENST00000625967 102 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 RNA5SP90-201ENST00000364801 99 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.18□□□□□ -1.9
PKHD1P08F94 TMBIM7P-201ENST00000418074 855 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.18□□□□□ -1.9
PKHD1P08F94 AC092754.1-201ENST00000472975 479 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 SNORA74D-201ENST00000516404 141 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.18□□□□□ -1.9
PKHD1P08F94 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 MIR3138-201ENST00000585238 82 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 AL161756.2-201ENST00000604597 246 ntBASIC3.18□□□□□ -1.9
PKHD1P08F94 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PKHD1P08F94 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
PKHD1P08F94 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PKHD1P08F94 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 SNORA48.4-201ENST00000391089 134 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
PKHD1P08F94 NOP56P2-201ENST00000447491 769 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AC108463.1-201ENST00000450258 347 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 NMNAT1P1-201ENST00000554095 876 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 KPNA2P3-201ENST00000584190 848 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PKHD1P08F94 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.17□□□□□ -1.9
PKHD1P08F94 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC3.17□□□□□ -1.9
PKHD1P08F94 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.17□□□□□ -1.9
PKHD1P08F94 RPL17P2-201ENST00000491913 451 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AC025884.1-201ENST00000556034 378 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 MIR3939-201ENST00000582614 106 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 AC090948.2-201ENST00000607363 564 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 ITPK1-AS1-201ENST00000553639 4701 ntBASIC3.17□□□□□ -1.9
PKHD1P08F94 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PKHD1P08F94 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.17□□□□□ -1.9
PKHD1P08F94 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKHD1P08F94 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms