Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC018445.2-201ENST00000622987 260 ntBASIC6.57□□□□□ -1.36
HLA-DOAP06340 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HLA-DOAP06340 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOAP06340 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC106754.1-201ENST00000562632 1513 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 RNU4-40P-201ENST00000364351 143 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AL121977.1-201ENST00000401636 979 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 SPTLC1P2-201ENST00000407089 121 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 RN7SKP279-201ENST00000411383 298 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AL390774.1-201ENST00000411924 246 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 PCNPP4-201ENST00000414817 517 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AL445528.1-201ENST00000426330 420 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC013410.1-201ENST00000436223 1232 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 DEFB109A-201ENST00000482450 265 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 BLZF2P-201ENST00000553776 1130 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AL021707.7-201ENST00000607991 416 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 AC004808.1-201ENST00000627671 721 ntBASIC6.56□□□□□ -1.36
HLA-DOAP06340 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-DOAP06340 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-DOAP06340 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOAP06340 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC137056.2-201ENST00000624055 1958 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOAP06340 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC005294.1-201ENST00000355509 281 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 RNU6-618P-201ENST00000363518 112 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 SNORA74A-201ENST00000364089 198 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOAP06340 RNU1-136P-201ENST00000384181 164 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC096921.1-201ENST00000411661 375 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 MTCO2P23-201ENST00000425216 680 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 NANOGP4-201ENST00000427230 913 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 MTND4LP14-201ENST00000429447 288 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 CNOT7P2-201ENST00000441051 832 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 RPS21P4-201ENST00000487122 248 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-DOAP06340 RPEP1-201ENST00000504507 658 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 OR5M14P-201ENST00000506803 618 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 PGAM1P13-201ENST00000507497 754 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 MTND2P32-201ENST00000521584 1038 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 HAUS8P1-201ENST00000549005 542 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC126177.5-201ENST00000549599 178 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC079148.1-201ENST00000565944 819 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 OR7A8P-201ENST00000595427 913 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AL445435.1-201ENST00000604232 665 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 AP001033.2-201ENST00000609701 1003 ntBASIC6.55□□□□□ -1.36
HLA-DOAP06340 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-DOAP06340 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms