Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FAR2P1-206ENST00000449736 709 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC097173.1-201ENST00000505862 819 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 OR4A46P-201ENST00000527255 933 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 OR11J2P-201ENST00000555298 907 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 BNIP3P35-201ENST00000604530 490 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AP005432.2-201ENST00000608162 586 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC126915.2-201ENST00000610957 190 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AL157762.1-201ENST00000619612 415 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC135068.12-201ENST00000637370 931 ntBASIC5.27□□□□□ -1.57
HLA-DQB2P05538 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DQB2P05538 AC063923.1-201ENST00000478982 1619 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 MIR600-201ENST00000385007 98 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 NUDT19P3-201ENST00000404698 555 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 RN7SKP229-201ENST00000410465 302 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 BX842559.2-201ENST00000451418 605 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC009127.1-201ENST00000467090 155 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC020779.1-201ENST00000478757 796 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC040958.1-201ENST00000561102 201 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 AC004808.2-201ENST00000627965 773 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 FRG1EP-201ENST00000634469 770 ntBASIC5.26□□□□□ -1.57
HLA-DQB2P05538 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DQB2P05538 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 PANDAR-201ENST00000629595 1506 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 COX5BP7-201ENST00000414780 274 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC072052.1-201ENST00000496556 306 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 MIR1269B-201ENST00000580405 75 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AL022394.1-201ENST00000606979 292 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 AL512624.1-201ENST00000613638 469 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 RPSAP73-201ENST00000614820 330 ntBASIC5.25□□□□□ -1.57
HLA-DQB2P05538 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms