Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL008638.3-201ENST00000623027 5182 ntBASIC2.23□□□□□ -2.05
USH2AO75445 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 MIR589-201ENST00000385238 99 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AL161909.1-201ENST00000397390 712 ntBASIC2.23□□□□□ -2.05
USH2AO75445 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH2AO75445 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.23□□□□□ -2.05
USH2AO75445 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 AGGF1P7-201ENST00000562369 913 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC010547.7-201ENST00000570323 333 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC005000.2-201ENST00000605468 310 ntBASIC2.23□□□□□ -2.05
USH2AO75445 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 IL6-206ENST00000407492 926 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 RNU6-628P-201ENST00000410675 107 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AC007562.1-201ENST00000421819 517 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC023274.2-201ENST00000445264 521 ntBASIC2.23□□□□□ -2.05
USH2AO75445 NDUFA5P8-201ENST00000449019 346 ntBASIC2.23□□□□□ -2.05
USH2AO75445 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH2AO75445 VN1R105P-201ENST00000486595 910 ntBASIC2.23□□□□□ -2.05
USH2AO75445 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 AC027309.2-201ENST00000520566 192 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH2AO75445 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH2AO75445 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 AL139095.3-201ENST00000419672 1203 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.23□□□□□ -2.05
USH2AO75445 CT45A11P-201ENST00000448043 1134 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 EIF4A2P4-201ENST00000458691 1196 ntBASIC2.23□□□□□ -2.05
USH2AO75445 OR2A3P-201ENST00000493774 953 ntBASIC2.23□□□□□ -2.05
USH2AO75445 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AC115286.1-201ENST00000604298 434 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AC005252.1-201ENST00000604518 1063 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AL133481.2-203ENST00000607558 139 ntBASIC2.23□□□□□ -2.05
USH2AO75445 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 ERG-210ENST00000442448 5034 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
USH2AO75445 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
USH2AO75445 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 MIR491-201ENST00000384877 84 ntBASIC2.23□□□□□ -2.05
USH2AO75445 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 GLUD1P3-202ENST00000508551 200 ntBASIC2.23□□□□□ -2.05
USH2AO75445 FTH1P21-201ENST00000512179 511 ntBASIC2.23□□□□□ -2.05
USH2AO75445 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC2.23□□□□□ -2.05
USH2AO75445 AGGF1P6-201ENST00000569213 976 ntBASIC2.23□□□□□ -2.05
USH2AO75445 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH2AO75445 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH2AO75445 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
USH2AO75445 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC2.22□□□□□ -2.05
USH2AO75445 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms