Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 H2AFZP6-201ENST00000444403 394 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 NDUFB4P1-201ENST00000462398 381 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 RN7SL751P-201ENST00000473281 284 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC117395.1-201ENST00000487390 403 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC068305.2-201ENST00000550567 1205 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 UBE2CP4-201ENST00000561405 535 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC005021.1-201ENST00000608730 355 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 Z97832.2-201ENST00000605896 4261 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AL031985.3-201ENST00000565390 2449 ntBASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM35Q9UPQ4 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 HDAC1P1-201ENST00000455482 1445 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 MTND5P30-201ENST00000452896 1731 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RNU6-543P-201ENST00000362576 108 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 Y_RNA.97-201ENST00000363094 102 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RNY4P34-201ENST00000364779 95 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SNORD15A-201ENST00000384214 148 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AL121977.1-201ENST00000401636 979 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 OR5W1P-201ENST00000423705 938 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RPL5P6-201ENST00000425640 886 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RPSAP32-201ENST00000432681 526 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 Z83313.1-201ENST00000433780 718 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RPL37P21-201ENST00000435890 276 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC008040.4-201ENST00000494834 768 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 OR7E163P-201ENST00000505943 894 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SNORA31.13-201ENST00000516624 135 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 COPS8P3-201ENST00000526024 482 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC087257.2-201ENST00000538759 928 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC138749.2-201ENST00000566048 167 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 NRBF2P1-201ENST00000587407 859 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC023513.1-201ENST00000604396 691 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC113361.1-201ENST00000606683 543 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 pRNA.12-201ENST00000614353 90 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 pRNA.3-201ENST00000615048 90 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 RPSAP68-201ENST00000625020 438 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC005355.2-201ENST00000625064 484 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 CREM-212ENST00000374728 1933 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 AC008555.1-201ENST00000561778 2757 ntBASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TRIM35Q9UPQ4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 AC090983.1-201ENST00000623426 3897 ntBASIC9.73□□□□□ -0.85
TRIM35Q9UPQ4 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms