Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 RNU6-1334P-201ENST00000516032 105 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC020937.1-201ENST00000519677 1013 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC060766.1-201ENST00000590824 627 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC016252.1-201ENST00000609721 474 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC109780.1-201ENST00000451768 1344 ntBASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP2Q9UDT6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 GVINP1-202ENST00000531871 7271 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AL022311.1-201ENST00000623726 19416 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC006484.1-201ENST00000435086 1884 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 SPTLC1P2-201ENST00000407089 121 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RNU4-34P-201ENST00000410431 124 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 PRUNEP1-201ENST00000425846 705 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AL136231.1-201ENST00000429407 730 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RPL7P56-201ENST00000429441 717 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 GSTM5P1-201ENST00000434751 660 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 OR52B5P-201ENST00000435337 951 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 CNOT7P2-201ENST00000441051 832 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC245047.2-201ENST00000441060 530 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AZGP1P2-201ENST00000454506 345 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RN7SL447P-201ENST00000494711 245 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 RPS17P5-201ENST00000498293 408 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 OR10G5P-201ENST00000532733 358 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC010503.3-201ENST00000594355 540 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC109583.2-201ENST00000617367 129 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 OR52B5P-202ENST00000641118 1110 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 TCP11X1-202ENST00000622971 1372 ntBASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CLIP2Q9UDT6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC005294.1-201ENST00000355509 281 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 MIR105-2-201ENST00000385083 81 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 RNA5SP339-201ENST00000390987 122 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 OR4K12P-201ENST00000406538 961 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AL139148.1-201ENST00000427122 680 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 FAM96AP1-201ENST00000430879 482 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC013410.1-201ENST00000436223 1232 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 SNORD125-201ENST00000459538 96 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC079841.1-201ENST00000481228 950 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC093763.2-201ENST00000505334 1223 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 OR5M14P-201ENST00000506803 618 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 HMGB1P44-201ENST00000508597 572 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 HMGB1P40-201ENST00000525121 540 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC106730.2-201ENST00000566641 540 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 WBP1LP8-201ENST00000617401 327 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 AL353796.1-201ENST00000561542 3241 ntBASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms