Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNA5SP236-201ENST00000516169 116 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MIOXP1-201ENST00000521205 835 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 OR10V2P-201ENST00000525296 764 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AKR1B1P3-201ENST00000525311 588 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC091078.2-201ENST00000557145 559 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 RN7SL451P-201ENST00000583026 299 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 TTR-205ENST00000613781 556 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 PHBP6-201ENST00000614021 786 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MIR6864-201ENST00000617935 70 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC027309.3-201ENST00000623419 351 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC008870.5-201ENST00000624143 650 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MLC1-201ENST00000311597 3933 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AC017071.1-201ENST00000564407 2204 ntBASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SEMA4D-201ENST00000339861 4258 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF879-201ENST00000444149 3304 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 HPCAL4-203ENST00000617690 4758 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 ESM1-202ENST00000381405 2169 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CACNB4-220ENST00000636129 2283 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CAMK2G-207ENST00000423381 3824 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CLN3-244ENST00000636147 3832 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 PGM1-201ENST00000371083 2657 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 AL137186.2-201ENST00000397264 3486 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 HHAT-201ENST00000261458 3594 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP3-3Q9BYR6 IFT122-203ENST00000348417 3877 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 AL513523.1-201ENST00000417868 1309 ntBASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 NBR1-206ENST00000590996 3446 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF446-205ENST00000596341 3922 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 OXCT1-201ENST00000196371 3388 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 DLG1-205ENST00000392382 2690 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 GSG1-201ENST00000337630 2390 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 RBMY1E-202ENST00000382658 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 PGAP2-225ENST00000493547 1772 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 BTN3A2-209ENST00000527422 1460 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 LST1-203ENST00000339530 635 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 Y_RNA.10-201ENST00000362371 110 ntBASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 Y_RNA.366-201ENST00000365540 102 ntBASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 S100A4-202ENST00000368714 531 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 CA5BP1-203ENST00000380334 1264 ntTSL 5 BASIC5.48□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU6-339P-201ENST00000384310 107 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms