Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SDAD1P3-201ENST00000427380 333 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 FTLP17-201ENST00000432567 525 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 RPS26P30-201ENST00000443431 335 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AL157827.1-201ENST00000447622 132 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 BTF3P15-201ENST00000455606 336 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC083798.1-201ENST00000472671 131 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 RN7SL868P-201ENST00000485915 303 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC091982.1-201ENST00000518134 520 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 IGKV3-34-201ENST00000521692 293 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AP000790.1-201ENST00000528891 737 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MYL12BP1-201ENST00000569826 507 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MTCO2P22-201ENST00000603246 681 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC092960.1-201ENST00000604762 351 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC006924.1-201ENST00000610750 559 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC084781.2-201ENST00000615568 161 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC092650.2-201ENST00000619984 902 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LRCH3Q96II8 TRIM53BP-201ENST00000532912 1720 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 MAPK10-329ENST00000641555 2656 ntBASIC8.26□□□□□ -1.09
LRCH3Q96II8 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
LRCH3Q96II8 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC093768.1-201ENST00000505987 2173 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TRIM51EP-201ENST00000524374 1516 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 ENSAP3-201ENST00000312710 333 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SNORD116-29-201ENST00000384516 83 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 RNU1-56P-201ENST00000391303 164 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 ATP5HP3-201ENST00000396994 486 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL161909.1-201ENST00000397390 712 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL136100.1-201ENST00000407696 330 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 RNU6-1068P-201ENST00000410958 103 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 RPL21P107-201ENST00000411449 460 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 SNRPFP1-201ENST00000414761 252 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 Z68868.1-201ENST00000429048 544 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC133104.1-201ENST00000429100 218 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 RPS24P13-201ENST00000442520 397 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC092601.1-201ENST00000444526 383 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AL034369.1-201ENST00000453808 477 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 RN7SL325P-201ENST00000460434 283 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 MTATP8P1-201ENST00000467115 207 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 RPS3AP50-201ENST00000487064 803 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 RPL7L1P4-201ENST00000513004 707 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC105417.1-201ENST00000514691 285 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 Y_RNA.718-201ENST00000517110 102 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 RN7SKP256-201ENST00000517201 314 ntBASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.25□□□□□ -1.09
LRCH3Q96II8 AC138832.1-201ENST00000522871 556 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms