Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 CU639417.4-201ENST00000623928 207 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 AC132825.1-201ENST00000463573 2247 ntBASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.4□□□□□ -1.55
PDLIM5Q96HC4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC144833.1-201ENST00000567953 4089 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC110792.3-201ENST00000595906 1614 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SNORD56.6-201ENST00000384569 71 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AL596448.1-201ENST00000415024 392 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 RPL12P17-201ENST00000432393 498 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC016772.1-201ENST00000444170 1261 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC092106.1-201ENST00000444291 373 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC084754.1-201ENST00000463466 464 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 RPSAP39-201ENST00000467439 883 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 UBFD1P1-201ENST00000473259 814 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LARP7P4-201ENST00000481075 878 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC011411.1-201ENST00000509592 876 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC087888.1-201ENST00000550884 1254 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 BMS1P7-201ENST00000602440 1052 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC090953.1-201ENST00000604305 1092 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 MIR1910-201ENST00000636955 80 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SAMMSON-209ENST00000641222 1100 ntBASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM5Q96HC4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC002525.1-201ENST00000624392 1622 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SNORA48.4-201ENST00000391089 134 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AL034403.1-201ENST00000399414 885 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC017019.1-201ENST00000426129 261 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RPL23AP4-201ENST00000427757 463 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 ARL4AP4-201ENST00000434170 518 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 TAAR4P-201ENST00000454843 1039 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RNU6-775P-201ENST00000459318 96 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC094085.1-201ENST00000468914 584 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RPL7AP10-201ENST00000481016 791 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC138866.2-201ENST00000508650 584 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC138832.1-201ENST00000522871 556 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 IGKV2-4-201ENST00000523070 340 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 OR11H3P-201ENST00000554547 982 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms