Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MIR105-1-201ENST00000385222 81 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC009804.1-201ENST00000400949 179 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 HSPA8P15-201ENST00000401676 786 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 REREP1Y-201ENST00000422655 198 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 REREP2Y-201ENST00000439103 200 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC005532.2-201ENST00000467154 373 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RPL7P39-201ENST00000481157 744 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNU1-43P-201ENST00000365052 165 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 SNORA48.4-201ENST00000391089 134 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 DDX39BP1-205ENST00000422507 192 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 BRWD1P3-201ENST00000428816 390 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RHOT1P3-201ENST00000436571 331 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC073850.1-201ENST00000449243 255 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 SETP3-201ENST00000581726 813 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 MIR6839-201ENST00000620425 113 ntBASIC5.35□□□□□ -1.55
CHD5Q8TDI0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHD5Q8TDI0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 U3.23-201ENST00000391132 200 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC017019.1-201ENST00000426129 261 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 RBMY2QP-201ENST00000429799 1147 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC079168.1-201ENST00000458741 345 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 RPS17P2-201ENST00000461663 408 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC009027.1-201ENST00000604510 479 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AP005131.7-201ENST00000610087 611 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AC026367.3-201ENST00000619032 590 ntBASIC5.34□□□□□ -1.55
CHD5Q8TDI0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.34□□□□□ -1.55
CHD5Q8TDI0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.34□□□□□ -1.56
CHD5Q8TDI0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD5Q8TDI0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD5Q8TDI0 MRRFP1-201ENST00000435941 1675 ntBASIC5.34□□□□□ -1.56
CHD5Q8TDI0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CHD5Q8TDI0 AC092451.3-201ENST00000625067 1343 ntBASIC5.34□□□□□ -1.56
CHD5Q8TDI0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CHD5Q8TDI0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
CHD5Q8TDI0 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
CHD5Q8TDI0 U3.3-201ENST00000362986 216 ntBASIC5.33□□□□□ -1.56
CHD5Q8TDI0 RNU1-19P-201ENST00000363306 165 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms