Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MRPL35P2-201ENST00000448009 511 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 RPS26P11-201ENST00000463445 348 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC135721.2-201ENST00000464237 300 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC023245.1-201ENST00000468501 517 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 RPS26P6-201ENST00000475156 348 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 OR7E157P-201ENST00000494376 911 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC090058.1-201ENST00000498788 435 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 MAST4-IT1-201ENST00000514241 658 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AP005902.2-201ENST00000518393 307 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 OR6C7P-201ENST00000547875 934 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC011611.5-201ENST00000552477 578 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC011260.1-201ENST00000578420 472 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 RN7SL753P-201ENST00000581238 290 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC134669.1-201ENST00000581275 672 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 MIR4732-201ENST00000581873 76 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC111186.1-201ENST00000604684 130 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AL645933.2-201ENST00000606743 1207 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC011374.2-201ENST00000607135 526 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 U4.5-201ENST00000617137 123 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 MIR1910-201ENST00000636955 80 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AL133268.1-201ENST00000405676 1401 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 AL133243.2-201ENST00000610331 1621 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RNF43Q68DV7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF43Q68DV7 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 DDX43P1-201ENST00000510713 1763 ntBASIC7.08□□□□□ -1.28
RNF43Q68DV7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL672167.1-206ENST00000356293 943 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 RNU6-181P-201ENST00000363225 107 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 RNA5SP333-201ENST00000363466 118 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 RNA5SP334-201ENST00000364825 118 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 SNORA64.3-201ENST00000365647 134 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 ATF1P1-201ENST00000406040 927 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC023128.2-201ENST00000420880 1223 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC112653.1-201ENST00000443851 386 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 COX6CP2-201ENST00000444980 225 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL121578.2-201ENST00000448797 447 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 RN7SL390P-201ENST00000470634 284 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 RN7SL70P-201ENST00000478322 302 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 HMGB1P3-201ENST00000502802 616 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC112198.1-201ENST00000505369 1220 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms