Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA81.3-201ENST00000517283 198 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC123904.2-201ENST00000548059 300 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 MEG8-218ENST00000556720 456 ntTSL 3 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC142086.3-201ENST00000563896 802 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 MIR5690-201ENST00000583739 73 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 AL137190.1-201ENST00000603288 282 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 AL390877.1-201ENST00000605704 214 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC113554.1-201ENST00000606284 490 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AC244100.4-201ENST00000617747 388 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 AL132796.3-201ENST00000624703 900 ntBASIC8.48□□□□□ -1.05
VARS2Q5ST30 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VARS2Q5ST30 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
VARS2Q5ST30 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 Y_RNA.270-201ENST00000364693 104 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 RNU6-1040P-201ENST00000383974 107 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 RNU6-456P-201ENST00000384493 107 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 GRPEL2P2-201ENST00000421856 670 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC097499.1-201ENST00000444277 208 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC009269.1-202ENST00000484381 469 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 CDC42P3-201ENST00000518493 633 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC068587.4-201ENST00000533893 186 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 MIR4642-201ENST00000583943 82 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC104695.3-201ENST00000604052 296 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AL451049.1-201ENST00000608672 497 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC102941.1-201ENST00000567616 1537 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.47□□□□□ -1.05
VARS2Q5ST30 AC012513.3-201ENST00000623250 2116 ntBASIC8.47□□□□□ -1.05
VARS2Q5ST30 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VARS2Q5ST30 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
VARS2Q5ST30 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VARS2Q5ST30 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.46□□□□□ -1.05
VARS2Q5ST30 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
VARS2Q5ST30 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VARS2Q5ST30 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms