Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 SDAD1P1-202ENST00000524156 2051 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 RN7SKP224-201ENST00000364140 325 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 SNORA70F-201ENST00000384142 135 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 BNIP3P19-201ENST00000605397 577 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC232271.1-201ENST00000602455 2715 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AL359955.1-201ENST00000455242 3275 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AP002530.1-201ENST00000405705 684 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AL049779.3-201ENST00000557141 606 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 AL163952.1-202ENST00000569625 600 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRRK2Q5S007 AC020915.5-201ENST00000596836 964 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.61□□□□□ -1.67
LRRK2Q5S007 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.61□□□□□ -1.67
LRRK2Q5S007 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 AL391261.1-201ENST00000555712 1479 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 RPS29P9-201ENST00000440360 171 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 RNU1-88P-201ENST00000459274 128 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 HMGN2P25-201ENST00000486956 268 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 TCL6_3.1-201ENST00000619064 137 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 AC092070.2-203ENST00000598377 3644 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 PARP4P1-201ENST00000435945 2337 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 AL049697.2-201ENST00000403708 294 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 RPL23AP1-201ENST00000428990 471 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRRK2Q5S007 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.6□□□□□ -1.67
LRRK2Q5S007 VN1R85P-201ENST00000601587 426 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 AC004232.3-201ENST00000622977 525 ntBASIC4.6□□□□□ -1.67
LRRK2Q5S007 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRRK2Q5S007 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms