Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.9□□□□□ -1.14
RXRBP28702 RPL7P45-201ENST00000455851 743 ntBASIC7.9□□□□□ -1.14
RXRBP28702 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.9□□□□□ -1.14
RXRBP28702 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.9□□□□□ -1.14
RXRBP28702 RPL5P22-201ENST00000480199 884 ntBASIC7.9□□□□□ -1.14
RXRBP28702 RN7SL561P-201ENST00000488553 281 ntBASIC7.9□□□□□ -1.14
RXRBP28702 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RXRBP28702 AC008427.1-201ENST00000503102 655 ntBASIC7.9□□□□□ -1.14
RXRBP28702 SLC25A15P5-201ENST00000508033 253 ntBASIC7.9□□□□□ -1.14
RXRBP28702 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC7.9□□□□□ -1.14
RXRBP28702 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
RXRBP28702 AC021146.10-201ENST00000515628 706 ntBASIC7.9□□□□□ -1.14
RXRBP28702 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.9□□□□□ -1.14
RXRBP28702 AC134698.5-201ENST00000519444 336 ntBASIC7.9□□□□□ -1.14
RXRBP28702 MRPS16P1-201ENST00000523462 412 ntBASIC7.9□□□□□ -1.14
RXRBP28702 IGLV3-30-201ENST00000524362 298 ntBASIC7.9□□□□□ -1.14
RXRBP28702 OR10V3P-201ENST00000525712 725 ntBASIC7.9□□□□□ -1.14
RXRBP28702 OR4A42P-201ENST00000531397 938 ntBASIC7.9□□□□□ -1.14
RXRBP28702 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.9□□□□□ -1.14
RXRBP28702 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.9□□□□□ -1.14
RXRBP28702 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
RXRBP28702 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.9□□□□□ -1.14
RXRBP28702 AC005771.1-201ENST00000585581 349 ntBASIC7.9□□□□□ -1.14
RXRBP28702 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.9□□□□□ -1.14
RXRBP28702 AC093765.1-201ENST00000603758 881 ntBASIC7.9□□□□□ -1.14
RXRBP28702 AP005229.2-201ENST00000609980 697 ntBASIC7.9□□□□□ -1.14
RXRBP28702 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.9□□□□□ -1.14
RXRBP28702 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.9□□□□□ -1.14
RXRBP28702 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.9□□□□□ -1.14
RXRBP28702 AC092111.1-201ENST00000618256 3358 ntBASIC7.9□□□□□ -1.14
RXRBP28702 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
RXRBP28702 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
RXRBP28702 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RXRBP28702 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.9□□□□□ -1.15
RXRBP28702 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RXRBP28702 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
RXRBP28702 ZNF840P-201ENST00000504759 1996 ntBASIC7.9□□□□□ -1.15
RXRBP28702 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 AC005832.2-201ENST00000538921 1430 ntBASIC7.89□□□□□ -1.15
RXRBP28702 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 RNU11-6P-201ENST00000391127 133 ntBASIC7.89□□□□□ -1.15
RXRBP28702 RPL5P5-201ENST00000392009 893 ntBASIC7.89□□□□□ -1.15
RXRBP28702 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AC113412.1-201ENST00000425840 504 ntBASIC7.89□□□□□ -1.15
RXRBP28702 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 TRY2P-201ENST00000448860 689 ntBASIC7.89□□□□□ -1.15
RXRBP28702 RPL7P55-201ENST00000450522 746 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.89□□□□□ -1.15
RXRBP28702 AC093166.4-201ENST00000457867 318 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AC108734.3-201ENST00000481241 1165 ntBASIC7.89□□□□□ -1.15
RXRBP28702 RPS3AP22-201ENST00000488297 769 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AC109462.1-201ENST00000491087 368 ntBASIC7.89□□□□□ -1.15
RXRBP28702 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.89□□□□□ -1.15
RXRBP28702 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 BNIP3P1-201ENST00000547295 580 ntBASIC7.89□□□□□ -1.15
RXRBP28702 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 AL110118.1-201ENST00000553543 400 ntBASIC7.89□□□□□ -1.15
RXRBP28702 FXNP1-201ENST00000555153 337 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.89□□□□□ -1.15
RXRBP28702 AC027455.1-201ENST00000574104 594 ntBASIC7.89□□□□□ -1.15
RXRBP28702 MIR3934-201ENST00000579806 107 ntBASIC7.89□□□□□ -1.15
RXRBP28702 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.89□□□□□ -1.15
RXRBP28702 AC084373.1-201ENST00000603311 235 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AL513477.2-201ENST00000607858 568 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AL035461.2-201ENST00000619201 524 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AC131009.3-201ENST00000621809 287 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AC019226.1-201ENST00000625666 515 ntBASIC7.89□□□□□ -1.15
RXRBP28702 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 AL132640.3-201ENST00000630473 177 ntBASIC7.89□□□□□ -1.15
RXRBP28702 EPS15P1-202ENST00000459691 2071 ntBASIC7.89□□□□□ -1.15
RXRBP28702 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.89□□□□□ -1.15
RXRBP28702 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 AL596244.1-201ENST00000567068 3779 ntBASIC7.89□□□□□ -1.15
RXRBP28702 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RXRBP28702 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
RXRBP28702 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
RXRBP28702 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RXRBP28702 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RXRBP28702 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RXRBP28702 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RXRBP28702 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RXRBP28702 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms