Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM1P09493 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.86□□□□□ -1.47
TPM1P09493 VDAC2P4-201ENST00000452925 711 ntBASIC5.86□□□□□ -1.47
TPM1P09493 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM1P09493 NPM1P29-201ENST00000483112 803 ntBASIC5.86□□□□□ -1.47
TPM1P09493 AC090638.1-201ENST00000498296 909 ntBASIC5.86□□□□□ -1.47
TPM1P09493 AC025458.1-201ENST00000506046 166 ntBASIC5.86□□□□□ -1.47
TPM1P09493 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM1P09493 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM1P09493 DPPA2P4-201ENST00000563717 878 ntBASIC5.86□□□□□ -1.47
TPM1P09493 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM1P09493 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM1P09493 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.86□□□□□ -1.47
TPM1P09493 AL139041.1-201ENST00000605480 610 ntBASIC5.86□□□□□ -1.47
TPM1P09493 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM1P09493 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.86□□□□□ -1.47
TPM1P09493 NAMPTP1-201ENST00000440465 2514 ntBASIC5.86□□□□□ -1.47
TPM1P09493 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TPM1P09493 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TPM1P09493 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.86□□□□□ -1.47
TPM1P09493 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.85□□□□□ -1.47
TPM1P09493 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.85□□□□□ -1.47
TPM1P09493 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TPM1P09493 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM1P09493 MIR375-201ENST00000362103 64 ntBASIC5.85□□□□□ -1.47
TPM1P09493 RNA5SP223-201ENST00000365174 120 ntBASIC5.85□□□□□ -1.47
TPM1P09493 SEPT7P2-202ENST00000398921 823 ntBASIC5.85□□□□□ -1.47
TPM1P09493 MIR1271-201ENST00000408537 86 ntBASIC5.85□□□□□ -1.47
TPM1P09493 OR13Z1P-201ENST00000416141 834 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AL354893.1-201ENST00000433735 348 ntBASIC5.85□□□□□ -1.47
TPM1P09493 GAPDHP58-201ENST00000438477 1006 ntBASIC5.85□□□□□ -1.47
TPM1P09493 NPM1P33-201ENST00000438918 872 ntBASIC5.85□□□□□ -1.47
TPM1P09493 MTND6P5-201ENST00000448266 512 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AL672138.1-201ENST00000450604 1015 ntBASIC5.85□□□□□ -1.47
TPM1P09493 RPS23P6-201ENST00000466136 431 ntBASIC5.85□□□□□ -1.47
TPM1P09493 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AC122718.2-201ENST00000505325 591 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM1P09493 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.85□□□□□ -1.47
TPM1P09493 AC027369.2-201ENST00000528030 440 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM1P09493 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM1P09493 MRPS21P7-201ENST00000566937 238 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AC022884.2-201ENST00000578535 580 ntBASIC5.85□□□□□ -1.47
TPM1P09493 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.85□□□□□ -1.47
TPM1P09493 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.85□□□□□ -1.47
TPM1P09493 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TPM1P09493 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TPM1P09493 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TPM1P09493 AL672167.1-204ENST00000641875 3017 ntBASIC5.85□□□□□ -1.47
TPM1P09493 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
TPM1P09493 IFIT1P1-201ENST00000400497 1449 ntBASIC5.84□□□□□ -1.47
TPM1P09493 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TPM1P09493 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 RPS3AP2-201ENST00000407190 754 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 AC127526.2-201ENST00000426436 775 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AL389925.1-201ENST00000432257 728 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AL512637.1-201ENST00000439523 1231 ntBASIC5.84□□□□□ -1.47
TPM1P09493 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM1P09493 AC005297.1-201ENST00000444765 862 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 EEF1B2P3-201ENST00000447718 678 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 AL591473.1-201ENST00000464297 313 ntBASIC5.84□□□□□ -1.47
TPM1P09493 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TPM1P09493 RN7SL612P-201ENST00000497704 295 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 AC114781.3-201ENST00000512083 142 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM1P09493 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.84□□□□□ -1.47
TPM1P09493 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.84□□□□□ -1.47
TPM1P09493 RBM22P12-201ENST00000567098 1255 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 AC092121.1-201ENST00000569452 202 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AP001496.3-201ENST00000580230 913 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.84□□□□□ -1.47
TPM1P09493 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.84□□□□□ -1.47
TPM1P09493 AC073869.10-201ENST00000642016 354 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC008691.1-209ENST00000642094 814 ntBASIC5.84□□□□□ -1.47
TPM1P09493 AC023421.1-201ENST00000590535 1785 ntBASIC5.84□□□□□ -1.47
TPM1P09493 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms